RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 MOB4Q9Y3A3 225 aa2.89□□□□□ -1.95
PMS1-216ENST00000447734 TBL2Q9Y4P3 447 aaKnown RBP2.89□□□□□ -1.95
PMS1-216ENST00000447734 MAP3K15Q6ZN16 1313 aa2.89□□□□□ -1.95
PMS1-216ENST00000447734 RALGAPA1Q6GYQ0 2036 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 ZNF233A6NK53 670 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 FTCDNL1E5RQL4 147 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 J3QLI3 93 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 KMOO15229 486 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SLC16A4O15374 487 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SLC31A1O15431 190 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 EDIL3O43854 480 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 GNAO1P09471 354 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 GIPP09681 153 aaPredicted RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 CHTF8P0CG12 524 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 CFC1BP0CG36 223 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 CFC1P0CG37 223 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 IGHV3-43DP0DP04 118 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 CD1EP15812 388 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 RCC1P18754 421 aaPredicted RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 CCNE1P24864 410 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 GGT2P36268 569 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 CEACAM6P40199 344 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 MYCNOSP40205 109 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 MDH2P40926 338 aaKnown RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 TGM4P49221 684 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 NCBP2P52298 156 aaKnown RBP eCLIP2.88□□□□□ -1.956e-8■■■□□ 16.3
PMS1-216ENST00000447734 STC1P52823 247 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 RAB38P57729 211 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 PRR3P79522 188 aaKnown RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 IL5RAQ01344 420 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 ZNF45Q02386 682 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 PON3Q15166 354 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 OR1Q1Q15612 314 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 NSDHLQ15738 373 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SGCAQ16586 387 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 GSG1Q2KHT4 349 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SYT6Q5T7P8 510 aaPredicted RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 PAMR1Q6UXH9 720 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 H2AFVQ71UI9 128 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SPICQ8N5J4 248 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 C2orf73Q8N5S3 287 aaPredicted RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 CCDC54Q8NEL0 328 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 OR5L1Q8NGL2 311 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 OR2AE1Q8NHA4 323 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 NT5CQ8TCD5 201 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 FAM151AQ8WW52 585 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 RXFP2Q8WXD0 754 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 RGP1Q92546 391 aaPredicted RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 ESR2Q92731 530 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 S100PBPQ96BU1 408 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 YIPF6Q96EC8 236 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 RDH12Q96NR8 316 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 HBEGFQ99075 208 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 APOL4Q9BPW4 351 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 VCX3BQ9H321 246 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 GNB4Q9HAV0 340 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 MYOZ1Q9NP98 299 aaPredicted RBP2.88□□□□□ -1.95
PMS1-216ENST00000447734 SLCO1B3Q9NPD5 702 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 MED4Q9NPJ6 270 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 FGFR1OP2Q9NVK5 253 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 DDIT4Q9NX09 232 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 ZNF581Q9P0T4 197 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 C3orf18Q9UK00 162 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SLC7A11Q9UPY5 501 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 ZNF257Q9Y2Q1 563 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 SIGLEC9Q9Y336 463 aa2.88□□□□□ -1.95
PMS1-216ENST00000447734 IGHV3OR16-9A0A0B4J2B5 98 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 A0A1W2PRG6 482 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 OR6C70A6NIJ9 312 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 LINC01619G3V211 115 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 H0Y980 276 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 GPR171O14626 319 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 UBDO15205 165 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 FGF16O43320 207 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 CYTH3O43739 400 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 HPGDSO60760 199 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 SERF1AO75920 110 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 RPP14O95059 124 aaKnown RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 IGHV3-23P01764 117 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 HLA-AP01891 365 aaKnown RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 APOEP02649 317 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 MLNP12872 115 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 ZNF35P13682 527 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 HIST1H1CP16403 213 aaKnown RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 ZNF7P17097 686 aaPredicted RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 GTF2H1P32780 548 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 P2RX1P51575 399 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 P2RY4P51582 365 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 RPL10AP62906 217 aaKnown RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 KDSRQ06136 332 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 RFX4Q33E94 735 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 CEACAM21Q3KPI0 293 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 PDZD11Q5EBL8 140 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 FAM45BPQ6NSW5 357 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 ZNF493Q6ZR52 646 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 USP50Q70EL3 339 aaPredicted RBP2.87□□□□□ -1.95
PMS1-216ENST00000447734 C10orf107Q8IVU9 208 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 ENTHD1Q8IYW4 607 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 SLC34A3Q8N130 599 aa2.87□□□□□ -1.95
PMS1-216ENST00000447734 ZNF786Q8N393 782 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms