RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 WDR38Q5JTN6 314 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 BCL2L15Q5TBC7 163 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 CIARTQ8N365 385 aaPredicted RBP13.59□□□□□ -0.23
USP39-205ENST00000442708 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 OR13G1Q8NGZ3 307 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 C10orf105Q8TEF2 133 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 SGCDQ92629 289 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 RGCCQ9H4X1 137 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 INPP5EQ9NRR6 644 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 TMEM100Q9NV29 134 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
USP39-205ENST00000442708 TREM2Q9NZC2 230 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 CLEC2DQ9UHP7 191 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 SNX5Q9Y5X3 404 aa13.59□□□□□ -0.23
USP39-205ENST00000442708 IGHV3-64DA0A0J9YX35 117 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 SLC1A7O00341 560 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 P2RY10O00398 339 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 CDC14BO60729 498 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 RP2O75695 350 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 PIPP12273 146 aaPredicted RBP13.58□□□□□ -0.24
USP39-205ENST00000442708 DCKP27707 260 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 ACTA2P62736 377 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 ACTG2P63267 376 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 DOC2BQ14184 412 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 CARTPTQ16568 116 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 ODF4Q2M2E3 257 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 ZMAT1Q5H9K5 638 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 FAM209AQ5JX71 171 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 OR2G6Q5TZ20 316 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 FDX2Q6P4F2 183 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 AHSA2Q719I0 299 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 FAM220AQ7Z4H9 259 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 KCTD20Q7Z5Y7 419 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 SYS1Q8N2H4 156 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 OR2G2Q8NGZ5 317 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 ITLN1Q8WWA0 313 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 FAM168AQ92567 244 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 TMEM80Q96HE8 168 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 FAM71F1Q96KD3 344 aaPredicted RBP13.58□□□□□ -0.24
USP39-205ENST00000442708 DIRC2Q96SL1 478 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 MOB1AQ9H8S9 216 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 SAP30LQ9HAJ7 183 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 DECR2Q9NUI1 292 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 CNOT2Q9NZN8 540 aaKnown RBP13.58□□□□□ -0.24
USP39-205ENST00000442708 FRRS1LQ9P0K9 344 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 RAB26Q9ULW5 256 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 RHBDD3Q9Y3P4 386 aa13.58□□□□□ -0.24
USP39-205ENST00000442708 ZNF469Q96JG9 3925 aaPredicted RBP13.58□□□□□ -0.24
USP39-205ENST00000442708 C2CD3Q4AC94 2353 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 ACANP16112 2415 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 A0A096LNT2 108 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 EFCAB10A6NFE3 127 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 VWC2LB2RUY7 222 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 TPD52L2O43399 206 aaKnown RBP13.57□□□□□ -0.24
USP39-205ENST00000442708 TACSTD2P09758 323 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 CFL1P23528 166 aaKnown RBP13.57□□□□□ -0.24
USP39-205ENST00000442708 PDLIM4P50479 330 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 MAB21L1Q13394 359 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 RIN1Q13671 783 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 CLEC2AQ6UVW9 174 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 RDH10Q8IZV5 341 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 PLPP7Q8NBV4 271 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 RDH5Q92781 318 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 MEGF10Q96KG7 1140 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 CNBD2Q96M20 576 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 OR2V2Q96R30 315 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 ZNF184Q99676 751 aaPredicted RBP13.57□□□□□ -0.24
USP39-205ENST00000442708 DCAF16Q9NXF7 216 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 MRPL15Q9P015 296 aaKnown RBP13.57□□□□□ -0.24
USP39-205ENST00000442708 ZNF391Q9UJN7 358 aa13.57□□□□□ -0.24
USP39-205ENST00000442708 YLPM1P49750 1951 aaKnown RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 IGHV1-69-2A0A0G2JMI3 117 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 LOC390937A0A1W2PQ73 354 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 IRGMA1A4Y4 181 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 H3BSH0 61 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 LMX1BO60663 402 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 GIFP27352 417 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 C21orf33P30042 268 aaPredicted RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 DDOSTP39656 456 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 CRYBB2P43320 205 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 MRPS11P82912 194 aaKnown RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 OR8G1Q15617 311 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 XAF1Q6GPH4 301 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 Q6ZSR3 168 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 COMMD2Q86X83 199 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 ZNF485Q8NCK3 441 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 ZNF540Q8NDQ6 660 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 ADAT1Q9BUB4 502 aaKnown RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 TMUB1Q9BVT8 246 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 FGF23Q9GZV9 251 aaPredicted RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 MYOZ1Q9NP98 299 aaPredicted RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 DLL4Q9NR61 685 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 ZNF275Q9NSD4 429 aaPredicted RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 UBAP1Q9NZ09 502 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 IL19Q9UHD0 177 aa13.56□□□□□ -0.24
USP39-205ENST00000442708 EXOSC1Q9Y3B2 195 aaKnown RBP13.56□□□□□ -0.24
USP39-205ENST00000442708 LOC100289279A0A1B0GTE1 492 aa13.55□□□□□ -0.24
USP39-205ENST00000442708 OR4C45A6NMZ5 311 aa13.55□□□□□ -0.24
USP39-205ENST00000442708 ANKRD30BLA7E2S9 258 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms