RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 NUAK2Q9H093 628 aa11.26□□□□□ -0.61
LINC00642-202ENST00000442515 VSX1Q9NZR4 365 aaPredicted RBP11.26□□□□□ -0.61
LINC00642-202ENST00000442515 BAG5Q9UL15 447 aa11.26□□□□□ -0.61
LINC00642-202ENST00000442515 CSMD3Q7Z407 3707 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.25□□□□□ -0.61
LINC00642-202ENST00000442515 GGT3PA6NGU5 568 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 BHLHE40O14503 412 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 CENPAP49450 140 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 CSNK2BP67870 215 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 ZNF92Q03936 586 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 MZT1Q08AG7 82 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 ST3GAL3Q11203 375 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 BLMHQ13867 455 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 VMACQ2NL98 169 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 SNAI3Q3KNW1 292 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 AGKQ53H12 422 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 STUMQ69YW2 141 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 PGM2L1Q6PCE3 622 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 WDR86Q86TI4 376 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 TMEM219Q86XT9 240 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 LINC00346Q8IVM7 164 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 C11orf53Q8IXP5 236 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 LNX2Q8N448 690 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 OR5D13Q8NGL4 314 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 OR10A6Q8NH74 314 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 OR2AE1Q8NHA4 323 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 DUS3LQ96G46 650 aaKnown RBP11.25□□□□□ -0.61
LINC00642-202ENST00000442515 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 PITX2Q99697 317 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 MUC13Q9H3R2 512 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 NMNAT1Q9HAN9 279 aaPredicted RBP11.25□□□□□ -0.61
LINC00642-202ENST00000442515 RNPEPL1Q9HAU8 725 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 C14orf119Q9NWQ9 140 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 A4GNTQ9UNA3 340 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 TCF19Q9Y242 345 aa11.25□□□□□ -0.61
LINC00642-202ENST00000442515 TRBV23-1A0A0A0MS06 115 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 CDC42EP2O14613 210 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 PAICSP22234 425 aaKnown RBP11.24□□□□□ -0.61
LINC00642-202ENST00000442515 SDHAP31040 664 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 GRK5P34947 590 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 VDAC2P45880 294 aaPredicted RBP11.24□□□□□ -0.61
LINC00642-202ENST00000442515 GPR4P46093 362 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 GSK3BP49841 420 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 PRKCDQ05655 676 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 DGUOKQ16854 277 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 PLA1AQ53H76 456 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 RABL3Q5HYI8 236 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 SLC18B1Q6NT16 456 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 WDR82Q6UXN9 313 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 Q6ZS46 218 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 CCDC121Q6ZUS5 278 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 PTCHD4Q6ZW05 846 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 OR5AU1Q8NGC0 362 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 OR5T2Q8NGG2 359 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 OR56B2PQ8NGI1 322 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 OR9Q1Q8NGQ5 310 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 ZBTB9Q96C00 473 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 TSSK2Q96PF2 358 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
LINC00642-202ENST00000442515 PNRC2Q9NPJ4 139 aaKnown RBP11.24□□□□□ -0.61
LINC00642-202ENST00000442515 SLC25A10Q9UBX3 287 aaPredicted RBP11.24□□□□□ -0.61
LINC00642-202ENST00000442515 LCE6AA0A183 80 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 VGLL3A8MV65 326 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 H0YAE9 185 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 M0R135 149 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 DCTN6O00399 190 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 TFF1P04155 84 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 CHRM2P08172 466 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
LINC00642-202ENST00000442515 GZMMP51124 257 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 SLC18A1P54219 525 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 ARSJQ5FYB0 599 aaPredicted RBP11.23□□□□□ -0.61
LINC00642-202ENST00000442515 DMRTC1Q5HYR2 192 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 TCTEX1D4Q5JR98 221 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 NKAPLQ5M9Q1 402 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 GLYATL3Q5SZD4 288 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 ATPAF1Q5TC12 328 aaPredicted RBP11.23□□□□□ -0.61
LINC00642-202ENST00000442515 OR1M1Q8NGA1 313 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 MUC7Q8TAX7 377 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 GAFA1Q96PS6 74 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 EBF4Q9BQW3 602 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 CHID1Q9BWS9 393 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 GPR61Q9BZJ8 451 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 SNTG1Q9NSN8 517 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 ZNF391Q9UJN7 358 aa11.23□□□□□ -0.61
LINC00642-202ENST00000442515 A6NDX4 124 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 SOCS2O14508 198 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 SYNGR1O43759 233 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 CLIC3O95833 236 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 ALDOBP05062 364 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 NDUFB7P17568 137 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 LMO1P25800 156 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 POU1F1P28069 291 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 RAB13P51153 203 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 TPTEP56180 551 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 GMFBP60983 142 aa11.22□□□□□ -0.61
LINC00642-202ENST00000442515 MAGOHP61326 146 aaKnown RBP11.22□□□□□ -0.61
LINC00642-202ENST00000442515 BLCAPP62952 87 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms