RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TMEM45BQ96B21 275 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 SARAFQ96BY9 339 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 TAAR6Q96RI8 345 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 KCNJ15Q99712 375 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RNF167Q9H6Y7 350 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 B3GAT2Q9NPZ5 323 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 PARPBPQ9NWS1 579 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 TXNL4BQ9NX01 149 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 METTL1Q9UBP6 276 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 GHRLQ9UBU3 117 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ST6GALNAC2Q9UJ37 374 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 SCP2D1Q9UJQ7 156 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 NPTNQ9Y639 398 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 URB1O60287 2271 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 FREM3P0C091 2139 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 A0A1B0GVC2 190 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 AQP7O14520 342 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 MRPL33O75394 65 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ABHD16AO95870 558 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 IFNA2P01563 188 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 IFNA10P01566 189 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 FGF9P31371 208 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 CDAP32320 146 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 NTF4P34130 210 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF81P51508 661 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 FCN2Q15485 313 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 PHYHD1Q5SRE7 291 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 C22orf42Q6IC83 251 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 MZT2BQ6NZ67 158 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RPUSD3Q6P087 351 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 LRRN1Q6UXK5 716 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 DCXRQ7Z4W1 244 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 LINC00346Q8IVM7 164 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 OR11H7Q8NGC8 314 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 GHSRQ92847 366 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 EXTL1Q92935 676 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 SOSTQ9BQB4 213 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RBM24Q9BX46 236 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 MRPL37Q9BZE1 423 aaKnown RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RIMS4Q9H426 269 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 ELOVL3Q9HB03 270 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 MYOZ1Q9NP98 299 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 GLRX2Q9NS18 164 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 G3V3Q6 166 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 M0R233 179 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 UPK3AO75631 287 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 GALP22466 123 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 KIR3DL2P43630 455 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 KCNMB1Q16558 191 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 C9orf152Q5JTZ5 239 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 AVPI1Q5T686 147 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 RIPPLY2Q5TAB7 128 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 SIAH3Q8IW03 269 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 OR2AJ1Q8NGZ0 328 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 KCTD7Q96MP8 289 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 PRDM14Q9GZV8 571 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 BCO1Q9HAY6 547 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 CHMP1AQ9HD42 196 aaPredicted RBP7.12□□□□□ -1.27
CCDC39-201ENST00000442201 PLSCR2Q9NRY7 297 aa7.12□□□□□ -1.27
CCDC39-201ENST00000442201 SLC22A20A6NK97 555 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 RFPL4AA6NLU0 287 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 ZNF724A8MTY0 619 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 RFPL4AL1F8VTS6 287 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 GABRPO00591 440 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 GPRIN2O60269 458 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 RGS9O75916 674 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-201ENST00000442201 APOC3P02656 99 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CD1AP06126 327 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 FCGR2AP12318 317 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 MSR1P21757 451 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 DNLZQ5SXM8 178 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 DEGS2Q6QHC5 323 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 PLXDC2Q6UX71 529 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 LAX1Q8IWV1 398 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 TUSC5Q8IXB3 177 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 OR10J5Q8NHC4 309 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 ST7LQ8TDW4 575 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 PGLYRP3Q96LB9 341 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 KCNS3Q9BQ31 491 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 NELFAQ9H3P2 528 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 C1orf198Q9H425 327 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CALHM2Q9HA72 323 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 GPR160Q9UJ42 338 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 LHX6Q9UPM6 363 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CMAHPQ9Y471 501 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 KRT33AO76009 404 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 SERPINA3P01011 423 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 HCKP08631 526 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 RBP2P50120 134 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 LSM6P62312 80 aaKnown RBP7.11□□□□□ -1.27
CCDC39-201ENST00000442201 PLEKHN1Q494U1 663 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-201ENST00000442201 FOXL2NBQ6ZUU3 175 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 DPPA2Q7Z7J5 298 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 OR1S1Q8NH92 325 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CPT1CQ8TCG5 803 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 ALKBH3Q96Q83 286 aaPredicted RBP7.11□□□□□ -1.27
CCDC39-201ENST00000442201 SLCO5A1Q9H2Y9 848 aa7.11□□□□□ -1.27
CCDC39-201ENST00000442201 CENPMQ9NSP4 180 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms