RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 H2AFB2P0C5Z0 115 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PPP3CBP16298 524 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF3P17036 446 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ARPC4P59998 168 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ACTA2P62736 377 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ACTG2P63267 376 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 FBXW9Q5XUX1 488 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF57Q68EA5 555 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 SDR9C7Q8NEX9 313 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF431Q8TF32 576 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 PIGTQ969N2 578 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 OXGR1Q96P68 337 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 ERMAPQ96PL5 475 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 POTEKPQ9BYX7 375 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR51V1Q9H2C8 321 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 MED29Q9NX70 200 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 KLK11Q9UBX7 282 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 RNF115Q9Y4L5 304 aa6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 TNRC6AQ8NDV7 1962 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR4C45A6NMZ5 311 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 A8MXK9 166 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF814B7Z6K7 855 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 GLSO94925 669 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 HEXAP06865 529 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 CALCBP10092 127 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 APEHP13798 732 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 LHX2P50458 406 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 H2BFSP57053 126 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SKP2Q13309 424 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF239Q16600 458 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 CNN2Q99439 309 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC19A3Q9BZV2 496 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 MED28Q9H204 178 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 PLEK2Q9NYT0 353 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 TAS2R5Q9NYW4 299 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 CISD1Q9NZ45 108 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 AK6Q9Y3D8 172 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SONP18583 2426 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 JMJD1CQ15652 2540 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 TRAV8-7A0A075B6U6 113 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 TMEM72A0PK05 275 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 LDLRAD4O15165 306 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 WISP2O76076 250 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR7A10O76100 309 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 NDUFB6O95139 128 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 IFNGR1P15260 489 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SLC6A6P31641 620 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 AQP2P41181 271 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 RAD52P43351 418 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 TDGF1P3P51864 188 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SCAND1P57086 179 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 GRK1Q15835 563 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 STAC2Q6ZMT1 411 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 CCDC28AQ8IWP9 274 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 TOMM5Q8N4H5 51 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR52E2Q8NGJ4 325 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 OR1J2Q8NGS2 313 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 MOSPD2Q8NHP6 518 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 STK35Q8TDR2 534 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 MRGPRFQ96AM1 343 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADAM19Q9H013 955 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 BARX1Q9HBU1 254 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 CRIM1Q9NZV1 1036 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 FRYLO94915 3013 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 BET1O15155 118 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 GLCEO94923 617 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 NDUFB2O95178 105 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SERPINA3P01011 423 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 KIR3DL2P43630 455 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 GBX2P52951 348 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 CLDN18P56856 261 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 RPS23P62266 143 aaKnown RBP6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 PITPNAQ00169 270 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 BAMBIQ13145 260 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 WDFY1Q8IWB7 410 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 BEST4Q8NFU0 473 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 C11orf40Q8WZ69 217 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 FBXW5Q969U6 566 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 Q96M85 177 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 HIST1H2AAQ96QV6 131 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 NMNAT3Q96T66 252 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 SHARPINQ9H0F6 387 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 C12orf10Q9HB07 376 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 KIF25Q9UIL4 384 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 IKZF2Q9UKS7 526 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 IER3IP1Q9Y5U9 82 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 MGAQ8IWI9 3026 aa6.47□□□□□ -1.37
CDC42BPA-208ENST00000442054 NOS1APO75052 506 aaPredicted RBP6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF254O75437 659 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 IL18BPO95998 194 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 MT-ATP6P00846 226 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 IGFBP3P17936 291 aaPredicted RBP6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 PSMB1P20618 241 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 IL11P20809 199 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 ARF1P84077 181 aaKnown RBP6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 ADORA2A-AS1P86434 159 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 ZNF74Q16587 644 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 MESTQ5EB52 335 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 TEX30Q5JUR7 227 aa6.46□□□□□ -1.37
CDC42BPA-208ENST00000442054 IZUMO1Q8IYV9 350 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms