RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 MRPS31Q92665 395 aaKnown RBP9.26□□□□□ -0.93
SYNE2-206ENST00000441438 GALMQ96C23 342 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 FAM46AQ96IP4 442 aaKnown RBP9.26□□□□□ -0.93
SYNE2-206ENST00000441438 OR52B2Q96RD2 323 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 RSPO3Q9BXY4 272 aaPredicted RBP9.26□□□□□ -0.93
SYNE2-206ENST00000441438 TXNIPQ9H3M7 391 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 RETNQ9HD89 108 aa9.26□□□□□ -0.93
SYNE2-206ENST00000441438 MRPS17Q9Y2R5 130 aaKnown RBP9.26□□□□□ -0.93
SYNE2-206ENST00000441438 YARS2Q9Y2Z4 477 aaKnown RBP9.26□□□□□ -0.93
SYNE2-206ENST00000441438 KIR2DS1A0A191URI9 304 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 CORTO00230 105 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 LRATO95237 230 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 DCTP40126 519 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 KIR2DS1Q14954 304 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 MS4A18Q3C1V0 323 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 OR10J3Q5JRS4 329 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 ELFN2Q5R3F8 820 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 LDLRAD2Q5SZI1 272 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TRNP1Q6NT89 227 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 HAPLN4Q86UW8 402 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 NEU4Q8WWR8 484 aaPredicted RBP9.25□□□□□ -0.93
SYNE2-206ENST00000441438 HIST1H2AAQ96QV6 131 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 EFCAB1Q9HAE3 211 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 CXorf21Q9HAI6 301 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TCRBV3S1A0A5B6 114 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 P2RX6O15547 441 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 KCNK2O95069 426 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 RAB36O95755 333 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 HAND1O96004 215 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 IGHG4P01861 327 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 CRYBA1P05813 215 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 ARSBP15848 533 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 SSTR4P31391 388 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 GAS1P54826 345 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TMBIM6P55061 237 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 OR5I1Q13606 314 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 DHRS13Q6UX07 377 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TMPRSS11BQ86T26 416 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 RXFP2Q8WXD0 754 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TSSK2Q96PF2 358 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 REG4Q9BYZ8 158 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 ASPDHA6ND91 283 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 RNF212BA8MTL3 300 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 BLOC1S5-TXNDC5H3BN57 136 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 HOXB5P09067 269 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 LRRC75BQ2VPJ9 315 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TTLL9Q3SXZ7 439 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF534Q76KX8 674 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 OR4E2Q8NGC2 313 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 OR5R1Q8NH85 324 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 S100ZQ8WXG8 99 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 MEGF9Q9H1U4 602 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 HINT3Q9NQE9 182 aaKnown RBP9.25□□□□□ -0.93
SYNE2-206ENST00000441438 OR1A1Q9P1Q5 309 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 B4GALT7Q9UBV7 327 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 TNFSF18Q9UNG2 199 aa9.25□□□□□ -0.93
SYNE2-206ENST00000441438 PDCD11Q14690 1871 aaKnown RBP9.24□□□□□ -0.93
SYNE2-206ENST00000441438 H7C417 338 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 CSN3P07498 182 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 GNA12Q03113 381 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 FAM166AQ6J272 317 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 CD163Q86VB7 1156 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 NIT1Q86X76 327 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 ACOT4Q8N9L9 421 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 NEIL2Q969S2 332 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 RAB39BQ96DA2 213 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 ATXN7L3BQ96GX2 97 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 GOLGA2P5Q9HBQ8 144 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 TMEM38BQ9NVV0 291 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 KIAA1671Q9BY89 1806 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 CLDN24A6NM45 220 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 EI24O14681 340 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 NKX2-8O15522 239 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 TOMM40O96008 361 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 SP9P0CG40 484 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 CLDN2P57739 230 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 SLC10A2Q12908 348 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-206ENST00000441438 C3AR1Q16581 482 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 ZSWIM7Q19AV6 140 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 FAM183BPQ6ZVS7 135 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 SLC29A4Q7RTT9 530 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF567Q8N184 647 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 PTX4Q96A99 478 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 CMBLQ96DG6 245 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 OR7D2Q96RA2 312 aa9.24□□□□□ -0.93
SYNE2-206ENST00000441438 SPRTNQ9H040 489 aaPredicted RBP9.24□□□□□ -0.93
SYNE2-206ENST00000441438 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-206ENST00000441438 EWSR1Q01844 656 aaKnown RBP eCLIP9.23□□□□□ -0.93
SYNE2-206ENST00000441438 CLINT1Q14677 625 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 LTC4SQ16873 150 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 TRMT10BQ6PF06 316 aaKnown RBP9.23□□□□□ -0.93
SYNE2-206ENST00000441438 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 SLC35G5Q96KT7 338 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 FAIM2Q9BWQ8 316 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 NKX6-2Q9C056 277 aaPredicted RBP9.23□□□□□ -0.93
SYNE2-206ENST00000441438 A0A1W2PNR3 127 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms