RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 DAOP14920 347 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 CDX1P47902 265 aaPredicted RBP10.58□□□□□ -0.72
LTBR-203ENST00000441074 ID4P47928 161 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 DNASE1L1P49184 302 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 ROM1Q03395 351 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 RPL18Q07020 188 aaKnown RBP10.58□□□□□ -0.72
LTBR-203ENST00000441074 SPOCK1Q08629 439 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 IL15RAQ13261 267 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 RAB32Q13637 225 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 NSUN5P2Q63ZY6 315 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 DGAT2L6Q6ZPD8 337 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 C1orf210Q8IVY1 113 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 OR56B1Q8NGI3 324 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 TERB2Q8NHR7 220 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SLC26A1Q9H2B4 701 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 GPR132Q9UNW8 380 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 RHBDD3Q9Y3P4 386 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 FLVCR1Q9Y5Y0 555 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SPTBP11277 2137 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SPAG17Q6Q759 2223 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 K7ESF4 209 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 LAMTOR5O43504 91 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 FOXS1O43638 330 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 IFNA2P01563 188 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 PMP2P02689 132 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SNCAP37840 140 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SULT1A1P50225 295 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 RAB1AP62820 205 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 MFGE8Q08431 387 aaPredicted RBP10.58□□□□□ -0.72
LTBR-203ENST00000441074 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.58□□□□□ -0.72
LTBR-203ENST00000441074 SLC18B1Q6NT16 456 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 CLEC18BQ6UXF7 455 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SLC35D2Q76EJ3 337 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 ATG4DQ86TL0 474 aaPredicted RBP10.58□□□□□ -0.72
LTBR-203ENST00000441074 GKN2Q86XP6 184 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 POC1AQ8NBT0 407 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 OR4D6Q8NGJ1 314 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 OR1J1Q8NGS3 322 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 OR51F2Q8NH61 342 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 TMEM230Q96A57 120 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 CMBLQ96DG6 245 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 SPACA1Q9HBV2 294 aa10.58□□□□□ -0.72
LTBR-203ENST00000441074 ASPMQ8IZT6 3477 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 CEACAM18A8MTB9 384 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 PRR33A8MZF0 331 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 LY86O95711 162 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 TSPAN15O95858 294 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 GAPDHP04406 335 aaKnown RBP10.57□□□□□ -0.72
LTBR-203ENST00000441074 RNF224P0DH78 156 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 HKR1P10072 659 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 NME1P15531 152 aaKnown RBP10.57□□□□□ -0.72
LTBR-203ENST00000441074 RIDAP52758 137 aaKnown RBP10.57□□□□□ -0.72
LTBR-203ENST00000441074 UCP2P55851 309 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ZNF239Q16600 458 aaKnown RBP10.57□□□□□ -0.72
LTBR-203ENST00000441074 WBP2NLQ6ICG8 309 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 NPSR1Q6W5P4 371 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 HIST2H3AQ71DI3 136 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 KDM8Q8N371 416 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ZNF383Q8NA42 475 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ADAMTS18Q8TE60 1221 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 OR10C1Q96KK4 312 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 SCRT1Q9BWW7 348 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 NRSN2Q9GZP1 204 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 CHST5Q9GZS9 411 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 C5orf66Q9H5L9 145 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 FANCMQ8IYD8 2048 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 SCN2AQ99250 2005 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 CABIN1Q9Y6J0 2220 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ZNF264O43296 627 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 SCGNO76038 276 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 JTBO76095 146 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ARG1P05089 322 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 FAM3AP98173 230 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 SLC9A3R2Q15599 337 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ZNF124Q15973 351 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 GUK1Q16774 197 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 KCTD18Q6PI47 426 aaPredicted RBP10.57□□□□□ -0.72
LTBR-203ENST00000441074 NUP54Q7Z3B4 507 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 STX12Q86Y82 276 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 ZNF565Q8N9K5 539 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 PNLDC1Q8NA58 520 aaKnown RBP10.57□□□□□ -0.72
LTBR-203ENST00000441074 AVL9Q8NBF6 648 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 OR9K2Q8NGE7 335 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 OR4C3Q8NH37 302 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 OR4K15Q8NH41 348 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 IER2Q9BTL4 223 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 UCK1Q9HA47 277 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 PPP4R1LQ9P1A2 415 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 LRIT1Q9P2V4 623 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 HHLA2Q9UM44 414 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 B9D1Q9UPM9 204 aa10.57□□□□□ -0.72
LTBR-203ENST00000441074 IFITM10A6NMD0 228 aa10.56□□□□□ -0.72
LTBR-203ENST00000441074 YIF1AO95070 293 aa10.56□□□□□ -0.72
LTBR-203ENST00000441074 HLA-DQA2P01906 255 aa10.56□□□□□ -0.72
LTBR-203ENST00000441074 S100A2P29034 98 aa10.56□□□□□ -0.72
LTBR-203ENST00000441074 IGLV3-21P80748 117 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms