RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GLRA1P23415 457 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 KIR3DL2P43630 455 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC6A9P48067 706 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 FOXK1P85037 733 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 DEFA6Q01524 100 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 AWAT1Q58HT5 328 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC16A9Q7RTY1 509 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 DCXRQ7Z4W1 244 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZSCAN4Q8NAM6 433 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 DCBLD2Q96PD2 775 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 DUSP15Q9H1R2 295 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 TAS2R8Q9NYW2 309 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 PI4KAP42356 2102 aa8.87□□□□□ -0.99
CDC42SE1-202ENST00000439374 PRR19A6NJB7 356 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 GPR37O15354 613 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 H2BFMP0C1H6 154 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 BCKDHBP21953 392 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 RIDAP52758 137 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC37A1P57057 533 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 CTAG1AP78358 180 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 EGR4Q05215 589 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 IKZF1Q13422 519 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 KIAA0141Q14154 515 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 TMEM225Q6GV28 225 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 ANKRD16Q6P6B7 361 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 HIST2H3AQ71DI3 136 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR5T2Q8NGG2 359 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR13C8Q8NGS7 320 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR4K15Q8NH41 348 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR6C1Q96RD1 312 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 SOX7Q9BT81 388 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 LMF2Q9BU23 707 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 IGHV1OR15-9A0A0B4J2B8 117 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 DUX1O43812 170 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 SOX15O60248 233 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 CRTAPO75718 401 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 AQP8O94778 261 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 AMY2BP19961 511 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 CDAP32320 146 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 CAMLGP49069 296 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 RAB2AP61019 212 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 HSD11B2P80365 405 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 C14orf28Q4W4Y0 310 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC18B1Q6NT16 456 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF343Q6P1L6 599 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 C5orf46Q6UWT4 87 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 DRAM2Q6UX65 266 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 MOB3CQ70IA8 216 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 TAF9BQ9HBM6 251 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 TRBV11-1A0A0K0K1C0 115 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 C9orf170A2RU37 121 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 S100PP25815 95 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 PPICP45877 212 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 EMP2P54851 167 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 HABP2Q14520 560 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF141Q15928 474 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 HAGHQ16775 308 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 RIF1Q5UIP0 2472 aaKnown RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 C1orf140Q5VVS0 124 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 PTCRAQ6ISU1 281 aaPredicted RBP8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 SYS1Q8N2H4 156 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR52N4Q8NGI2 321 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 FAM213BQ8TBF2 198 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR5B2Q96R09 309 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 NRIP2Q9BQI9 281 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 VN1R1Q9GZP7 353 aa8.86□□□□□ -0.99
CDC42SE1-202ENST00000439374 LOC107986453A0A1B0GWG9 222 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 UPK3AO75631 287 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CNOT4O95628 575 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 FBP1P09467 338 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 ABOP16442 354 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 S100A2P29034 98 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 KLHL24Q6TFL4 600 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 DHRS11Q6UWP2 260 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 MEX3BQ6ZN04 569 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 ATG4DQ86TL0 474 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 C20orf196Q8IYI0 205 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 STT3BQ8TCJ2 826 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 SLC46A1Q96NT5 459 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CLN5O75503 358 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR2F2O95006 317 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CD27P26842 260 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CSNK2A1P68400 391 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR2F1Q13607 317 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 MIDNQ504T8 468 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 LINC01590Q5TEZ4 76 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 PLXDC1Q8IUK5 500 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 TMEM217Q8N7C4 229 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 SMRP1Q8NCR6 262 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CSNK2A3Q8NEV1 391 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR6S1Q8NH40 331 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 MED9Q9NWA0 146 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 DENND4AQ7Z401 1863 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF705GA8MUZ8 300 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 H0YIZ8 118 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 CD63P08962 238 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 BIDP55957 195 aa8.85□□□□□ -0.99
CDC42SE1-202ENST00000439374 MLF1P58340 268 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms