RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HLA-GP17693 338 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 MPGP29372 298 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 FAM189A2Q15884 450 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 SGCAQ16586 387 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 LIN54Q6MZP7 749 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 RTN4RL2Q86UN3 420 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 TMEM123Q8N131 208 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 RHBDD1Q8TEB9 315 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 RBPMSQ93062 196 aaKnown RBP16.37■□□□□ 0.21
CLK1-205ENST00000434813 NABP1Q96AH0 204 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 GNRHR2Q96P88 292 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 TMEM59Q9BXS4 323 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 CST11Q9H112 138 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 DKKL1Q9UK85 242 aa16.37■□□□□ 0.21
CLK1-205ENST00000434813 TMA7Q9Y2S6 64 aaKnown RBP16.37■□□□□ 0.21
CLK1-205ENST00000434813 ZIC3O60481 467 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 MPIG6BO95866 241 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 CSNK2A1P68400 391 aaPredicted RBP16.36■□□□□ 0.21
CLK1-205ENST00000434813 PPP1R1AQ13522 171 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 ENDOGQ14249 297 aaKnown RBP16.36■□□□□ 0.21
CLK1-205ENST00000434813 GFOD2Q3B7J2 385 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 PHYHD1Q5SRE7 291 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 SIGIRRQ6IA17 410 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 TMEM65Q6PI78 240 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 ALKAL2Q6UX46 152 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 GJC3Q8NFK1 279 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 MITD1Q8WV92 249 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 ZNF385AQ96PM9 386 aaKnown RBP16.36■□□□□ 0.21
CLK1-205ENST00000434813 RDH8Q9NYR8 311 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 ZNF230Q9UIE0 474 aaPredicted RBP16.36■□□□□ 0.21
CLK1-205ENST00000434813 NUP50Q9UKX7 468 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 IGKV1-9A0A0C4DH69 117 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 OR2AT4A6NND4 320 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 NPIPA2E9PIF3 369 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 E9PLN8 166 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 NPIPA3F8WFD2 350 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 CD63P08962 238 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 ZNF250P15622 560 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 NAT1P18440 290 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 GUCA1AP43080 201 aaPredicted RBP16.36■□□□□ 0.21
CLK1-205ENST00000434813 PLAC9Q5JTB6 97 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 SLC51BQ86UW2 128 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 NAA40Q86UY6 237 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 ARMC10Q8N2F6 343 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 OR9K2Q8NGE7 335 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 SUN5Q8TC36 379 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 RAB3CQ96E17 227 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 PGAM5Q96HS1 289 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 NAA11Q9BSU3 229 aaPredicted RBP16.36■□□□□ 0.21
CLK1-205ENST00000434813 LRFN3Q9BTN0 628 aa16.36■□□□□ 0.21
CLK1-205ENST00000434813 LOC100509620A0A075B734 347 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 NSG1A0A0A6YYJ2 146 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 A0A0U1RQV5 110 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 C9orf170A2RU37 121 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 OR5H14A6NHG9 310 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 IFNA6P05013 189 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 LIPCP11150 499 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 PRF1P14222 555 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 ACP1P24666 158 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 MLF1P58340 268 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 ARPC4P59998 168 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 HIST1H3AP68431 136 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 PNLIPRP3Q17RR3 467 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 ACTBL2Q562R1 376 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 HIST2H3PS2Q5TEC6 136 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 RFPL4BQ6ZWI9 263 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 HIST2H3AQ71DI3 136 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 RPS19BP1Q86WX3 136 aaKnown RBP16.35■□□□□ 0.21
CLK1-205ENST00000434813 TMEM156Q8N614 296 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 TMEM41AQ96HV5 264 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 LYZL4Q96KX0 146 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 HPF1Q9NWY4 346 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 IGHV3-15A0A0B4J1V0 119 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 LNP1A1A4G5 178 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 SOCS1O15524 211 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 WDPCPO95876 746 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 SLC25A4P12235 298 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 OTX1P32242 354 aaPredicted RBP16.35■□□□□ 0.21
CLK1-205ENST00000434813 THBS4P35443 961 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 ECH1Q13011 328 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 ZNF660Q6AZW8 331 aaPredicted RBP16.35■□□□□ 0.21
CLK1-205ENST00000434813 RGS7BPQ6MZT1 257 aaPredicted RBP16.35■□□□□ 0.21
CLK1-205ENST00000434813 OR56B1Q8NGI3 324 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 OR4K15Q8NH41 348 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 UCN2Q96RP3 112 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 GPER1Q99527 375 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 DHRS9Q9BPW9 319 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 REG4Q9BYZ8 158 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 NARFLQ9H6Q4 476 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 ZNF160Q9HCG1 818 aa16.35■□□□□ 0.21
CLK1-205ENST00000434813 FOXD3Q9UJU5 478 aaPredicted RBP16.35■□□□□ 0.21
CLK1-205ENST00000434813 C5orf63A6NC05 138 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 MFSD2BA6NFX1 497 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 MFNGO00587 321 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 DHHO43323 396 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 M6PRP20645 277 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 FOLR3P41439 243 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 NUBP1P53384 320 aa16.34■□□□□ 0.21
CLK1-205ENST00000434813 SUCLG1P53597 346 aaKnown RBP16.34■□□□□ 0.21
CLK1-205ENST00000434813 RAC1P63000 192 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms