RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 PLPP7Q8NBV4 271 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 RELL2Q8NC24 303 aaPredicted RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 SLC30A7Q8NEW0 376 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 TBC1D15Q8TC07 691 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 AP3S1Q92572 193 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 REEP6Q96HR9 211 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 POM121L2Q96KW2 1035 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 LYZL4Q96KX0 146 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 ZNF75AQ96N20 296 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 C1QTNF5Q9BXJ0 243 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 C6orf62Q9GZU0 229 aaPredicted RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 MMP27Q9H306 513 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 SMURF1Q9HCE7 757 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 NPDC1Q9NQX5 325 aaPredicted RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 ZNF275Q9NSD4 429 aaPredicted RBP9.76□□□□□ -0.85
LINC00539-203ENST00000434601 TAS2R4Q9NYW5 299 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 CKLFQ9UBR5 152 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 ZNF391Q9UJN7 358 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 FOXJ3Q9UPW0 622 aa9.76□□□□□ -0.85
LINC00539-203ENST00000434601 A0A075B6Q4 140 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 TRAV8-7A0A075B6U6 113 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 A0A0G2JK05 382 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 A0A1W2PR80 420 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 FAM221AA4D161 298 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 NOTOA8MTQ0 251 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 XRCC2O43543 280 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 LMX1BO60663 402 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 DHRS3O75911 302 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 CCL2P13500 99 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 CBR1P16152 277 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 ZNF20P17024 532 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 CCNOP22674 350 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 IDH3GP51553 393 aaPredicted RBP9.75□□□□□ -0.85
LINC00539-203ENST00000434601 TBC1D28Q2M2D7 210 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 TIMM23BQ5SRD1 257 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 ASPHD2Q6ICH7 369 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 SFXN4Q6P4A7 337 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 COLCA1Q6ZS62 124 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 LINC00299Q6ZSB3 139 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 Q6ZSR3 168 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 LRRTM1Q86UE6 522 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 NR2C2APQ86WQ0 139 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 LIX1LQ8IVB5 337 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 PARP16Q8N5Y8 322 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 OR1J2Q8NGS2 313 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 OR14K1Q8NGZ2 314 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 NINJ1Q92982 152 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 MS4A3Q96HJ5 214 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 SOX7Q9BT81 388 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 PLEKHA1Q9HB21 404 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 MOV10Q9HCE1 1003 aaKnown RBP9.75□□□□□ -0.85
LINC00539-203ENST00000434601 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 CRNNQ9UBG3 495 aaPredicted RBP9.75□□□□□ -0.85
LINC00539-203ENST00000434601 AK6Q9Y3D8 172 aaKnown RBP9.75□□□□□ -0.85
LINC00539-203ENST00000434601 V9GYS6 101 aa9.75□□□□□ -0.85
LINC00539-203ENST00000434601 PRRC2AP48634 2157 aaKnown RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 LOC390937A0A1W2PQ73 354 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 ANXA2P2A6NMY6 339 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 DHRS7CA6NNS2 312 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 IGKV3-15P01624 115 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 MAS1P04201 325 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 CELA3BP08861 270 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 IGFBP3P17936 291 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 ADRA2CP18825 462 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 PPP3R1P63098 170 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 SLC25A35Q3KQZ1 300 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 C1QTNF12Q5T7M4 302 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 MYPOPQ86VE0 399 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 SERPINA12Q8IW75 414 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 FAM169BQ8N8A8 192 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 STEAP2Q8NFT2 490 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 OR6Q1Q8NGQ2 317 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 OR2AE1Q8NHA4 323 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 AKAP1Q92667 903 aaKnown RBP eCLIP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 APOBEC3DQ96AK3 386 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 SGK3Q96BR1 496 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 S100PBPQ96BU1 408 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 FGGYQ96C11 551 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 ADAT3Q96EY9 351 aaPredicted RBP9.74□□□□□ -0.85
LINC00539-203ENST00000434601 LRRC46Q96FV0 321 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 GFI1Q99684 422 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 ACTR6Q9GZN1 396 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 CDH20Q9HBT6 801 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 ELOVL5Q9NYP7 299 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 SLC25A15Q9Y619 301 aa9.74□□□□□ -0.85
LINC00539-203ENST00000434601 ACANP16112 2415 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 ANKRD61A6NGH8 418 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 AIPO00170 330 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 IGLV1-44P01699 117 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 EPXP11678 715 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 CD99P14209 185 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 PAX7P23759 505 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 CCKARP32238 428 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 THBS4P35443 961 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 GNALP38405 381 aa9.73□□□□□ -0.85
LINC00539-203ENST00000434601 WNT5AP41221 380 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms