RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 ADAM10O14672 748 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 ANGPTL7O43827 346 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 FARS2O95363 451 aaKnown RBP13.79□□□□□ -0.2
SCARF1-203ENST00000434376 RFPL3SP0C7P2 107 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 OR3A4PP47883 348 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 BPIFB2Q8N4F0 458 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 B3GAT1Q9P2W7 334 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 OTOGLQ3ZCN5 2332 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 TRBV5-5A0A0J9YX44 114 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 FAM166BA8MTA8 275 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 TP53I11O14683 189 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 TTRP02766 147 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 GUSBP08236 651 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 RAB40ALP0C0E4 278 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 OR10S1Q8NGN2 331 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 OR1J2Q8NGS2 313 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 RAB40AQ8WXH6 277 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 VRK1Q99986 396 aaPredicted RBP13.79□□□□□ -0.2
SCARF1-203ENST00000434376 CYB5R1Q9UHQ9 305 aa13.79□□□□□ -0.2
SCARF1-203ENST00000434376 SHANK1Q9Y566 2161 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 TO15178 435 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF806P0C7X5 589 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 GALNSP34059 522 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 GABREP78334 506 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 GUCA2BQ16661 112 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 PHYHD1Q5SRE7 291 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 TRAPPC6BQ86SZ2 158 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 TMEM17Q86X19 198 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 CATSPERDQ86XM0 798 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 AKR7LQ8NHP1 331 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 MFSD8Q8NHS3 518 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 NAT6Q93015 286 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 EDARQ9UNE0 448 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 A0A1W2PQD3 144 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 OR14I1A6ND48 311 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 E9PLN8 166 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 F8W036 122 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 SLC17A2O00624 439 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 CXCL13O43927 109 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 UMODP07911 640 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 B4GALT1P15291 398 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 BLOC1S1P78537 153 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 GLIPR1L1Q6UWM5 242 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF584Q8IVC4 421 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 OR2M3Q8NG83 312 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 ST7LQ8TDW4 575 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 KCNK17Q96T54 332 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 ZCCHC4Q9H5U6 513 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 LHFPL6Q9Y693 200 aa13.78□□□□□ -0.2
SCARF1-203ENST00000434376 A0A096LPE4 126 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 A0A1W2PPZ6 126 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF736B4DX44 427 aaPredicted RBP13.77□□□□□ -0.2
SCARF1-203ENST00000434376 C10orf142B7Z368 130 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 XRCC3O43542 346 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 STK17BO94768 372 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF93P35789 620 aaPredicted RBP13.77□□□□□ -0.2
SCARF1-203ENST00000434376 DLSTP36957 453 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 CSNK1A1P48729 337 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 CX3CR1P49238 355 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 C12orf45Q8N5I9 185 aaPredicted RBP13.77□□□□□ -0.2
SCARF1-203ENST00000434376 ST8SIA1Q92185 356 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 FANCFQ9NPI8 374 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 ZNF701Q9NV72 531 aaPredicted RBP13.77□□□□□ -0.2
SCARF1-203ENST00000434376 EMC3Q9P0I2 261 aa13.77□□□□□ -0.2
SCARF1-203ENST00000434376 FAM230AA0A1W2PPH8 454 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 TUBAL3A6NHL2 446 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 AGPAT2O15120 278 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 CPN1P15169 458 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 GABRR1P24046 479 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 FOLR3P41439 243 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 HSD17B13Q7Z5P4 300 aaPredicted RBP13.77□□□□□ -0.21
SCARF1-203ENST00000434376 OR1S2Q8NGQ3 325 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 ASB17Q8WXJ9 295 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 CMSS1Q9BQ75 279 aaKnown RBP13.77□□□□□ -0.21
SCARF1-203ENST00000434376 WDR13Q9H1Z4 485 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 OR2S2Q9NQN1 319 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 A0A1W2PPC1 479 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 OR6C76A6NM76 312 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 IFNA6P05013 189 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 AVPR2P30518 371 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 FJX1Q86VR8 437 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 C1orf210Q8IVY1 113 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 GABRG1Q8N1C3 465 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 OR8B12Q8NGG6 310 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 THAP6Q8TBB0 222 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 CLDN23Q96B33 292 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 ZNF845Q96IR2 970 aaPredicted RBP13.77□□□□□ -0.21
SCARF1-203ENST00000434376 LRFN5Q96NI6 719 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 G6PC2Q9NQR9 355 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 RHBDD3Q9Y3P4 386 aa13.77□□□□□ -0.21
SCARF1-203ENST00000434376 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 OR2A4O95047 310 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 BDKRB2P30411 391 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 SSR4P51571 173 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 ISXQ2M1V0 245 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 ELFN2Q5R3F8 820 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 ATP1A1-AS1Q5TC04 95 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 ANKRD16Q6P6B7 361 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 DHRS13Q6UX07 377 aa13.76□□□□□ -0.21
SCARF1-203ENST00000434376 KMT5CQ86Y97 462 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms