RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 WSB1Q9Y6I7 421 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 FRMPD3Q5JV73 1810 aa2.02□□□□□ -2.09
CLK1-204ENST00000432425 NRCAMQ92823 1304 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 PCM1Q15154 2024 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 MSH6P52701 1360 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 EIF3AQ14152 1382 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 CCNB3Q8WWL7 1395 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 KDM5BQ9UGL1 1544 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 KIF1BO60333 1816 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 VIRMAQ69YN4 1812 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 TRBV6-6A0A0A6YYG2 114 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 A0A1B0GVG6 124 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 PSMB11A5LHX3 300 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 CENPXA8MT69 81 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 F5H768 121 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 TMX2-CTNND1H3BSU7 103 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 H7C0C1 242 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 J3QLI3 93 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 M0QZ92 97 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 AZIN1O14977 448 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 HSBP1O75506 76 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 MPZL1O95297 269 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 CLDN9O95484 217 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 IGHG4P01861 327 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 HLA-HP01893 362 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 APOC1P02654 83 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 KLK1P06870 262 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 NBEAP1P0C6P0 100 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ADRB3P13945 408 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 GFAPP14136 432 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 WARSP23381 471 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 IVDP26440 423 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 PCK1P35558 622 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 CEACAM6P40199 344 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 TMED10P49755 219 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 CDK9P50750 372 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 DAP3P51398 398 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 HNRNPA3P51991 378 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 CRYBA4P53673 196 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 AP1S2P56377 157 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 RHOAP61586 193 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 AP1S1P61966 158 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 FAM3AP98173 230 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 MLLT11Q13015 90 aaPredicted RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 SRSF6Q13247 344 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 SKP2Q13309 424 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 RAB31Q13636 194 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 OR4D1Q15615 310 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 TOMM34Q15785 309 aaPredicted RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 RPEL1Q2QD12 228 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 BSXQ3C1V8 233 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 SPIN3Q5JUX0 258 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 TIMM23BQ5SRD1 257 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 C9orf135Q5VTT2 229 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 SAXO2Q658L1 398 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 STUMQ69YW2 141 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 C4orf22Q6V702 233 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 STAC2Q6ZMT1 411 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 LINC00336Q6ZUF6 198 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 NT5DC3Q86UY8 548 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 SKA3Q8IX90 412 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 TMEM251Q8N6I4 163 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 LRRC52Q8N7C0 313 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 C12orf29Q8N999 325 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 OR9A4Q8NGU2 314 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 OR2AE1Q8NHA4 323 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 CNIH3Q8TBE1 160 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 PLPPR1Q8TBJ4 325 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 MAGEE2Q8TD90 523 aaPredicted RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 APH1BQ8WW43 257 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 FLYWCH2Q96CP2 140 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 CXorf40BQ96DE9 158 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 YIPF6Q96EC8 236 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 CENPNQ96H22 339 aaPredicted RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 ANKRD36BP1Q96IX9 119 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 FAM210BQ96KR6 192 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ATP5SQ99766 215 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 SLC6A7Q99884 636 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ECSITQ9BQ95 431 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 TIPINQ9BVW5 301 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ING2Q9H160 280 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ALX4Q9H161 411 aaPredicted RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 RHOFQ9HBH0 211 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 NMRAL1Q9HBL8 299 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 POPDC2Q9HBU9 364 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 MYOZ1Q9NP98 299 aaPredicted RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 AGPAT4Q9NRZ5 378 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 BABAM2Q9NXR7 383 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ZNF225Q9UK10 706 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 PSG11Q9UQ72 335 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 YARS2Q9Y2Z4 477 aaKnown RBP2.01□□□□□ -2.09
CLK1-204ENST00000432425 NAV1Q8NEY1 1877 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 ADGRA3Q8IWK6 1321 aa2.01□□□□□ -2.09
CLK1-204ENST00000432425 SPEF2Q9C093 1822 aa2□□□□□ -2.09
CLK1-204ENST00000432425 ARHGEF10O15013 1369 aa2□□□□□ -2.09
CLK1-204ENST00000432425 ABCC11Q96J66 1382 aa2□□□□□ -2.09
CLK1-204ENST00000432425 CEP152O94986 1710 aa2□□□□□ -2.09
CLK1-204ENST00000432425 IGKV2-28A0A075B6P5 120 aa2□□□□□ -2.09
CLK1-204ENST00000432425 IGHV1OR15-1A0A075B7D0 117 aa2□□□□□ -2.09
CLK1-204ENST00000432425 KIR2DL5BA0A0G2JN68 375 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms