RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LDLRAD3Q86YD5 345 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 KIR3DL3Q8N743 410 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 OR51L1Q8NGJ5 315 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 OR9Q1Q8NGQ5 310 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 CDRT15Q96T59 188 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 CITED1Q99966 193 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 NMNAT2Q9BZQ4 307 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 CENPMQ9NSP4 180 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 TAGLN3Q9UI15 199 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
MSH5-208ENST00000429846 ZNF593O00488 134 aaPredicted RBP12.31□□□□□ -0.44
MSH5-208ENST00000429846 DVL1O14640 695 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 CCNB2O95067 398 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 SLC2A1P11166 492 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 SPI1P17947 270 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 MSX2P35548 267 aaPredicted RBP12.31□□□□□ -0.44
MSH5-208ENST00000429846 RELBQ01201 579 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 DEFA6Q01524 100 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 CRMP1Q14194 572 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 SNCBQ16143 134 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 MICBQ29980 383 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 CDONQ4KMG0 1287 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 ZNF826PQ6ZT77 177 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 RHOUQ7L0Q8 258 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 OR2T33Q8NG76 320 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 ZNRF4Q8WWF5 429 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 C12orf43Q96C57 262 aaKnown RBP12.31□□□□□ -0.44
MSH5-208ENST00000429846 FAM107BQ9H098 131 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 TNFRSF19Q9NS68 423 aa12.31□□□□□ -0.44
MSH5-208ENST00000429846 RPUSD1Q9UJJ7 312 aaKnown RBP12.31□□□□□ -0.44
MSH5-208ENST00000429846 A0A1B0GVI7 797 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 DHRS12A0PJE2 317 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 C5orf63A6NC05 138 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 M0QZ24 198 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 TIMM23O14925 209 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 GPR37O15354 613 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 TBX1O43435 398 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 GASTP01350 101 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 IFNGP01579 166 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 HSD11B1P28845 292 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 CX3CR1P49238 355 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 ARF6P62330 175 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 FAM3AP98173 230 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 TIGD6Q17RP2 521 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 METAP1DQ6UB28 335 aaPredicted RBP12.3□□□□□ -0.44
MSH5-208ENST00000429846 SLC16A9Q7RTY1 509 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 SLC36A1Q7Z2H8 476 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 DEFB107AQ8IZN7 70 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 ZNF511Q8NB15 262 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 AQP11Q8NBQ7 271 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 OR6K6Q8NGW6 343 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 LRRC29Q8WV35 223 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 LRTOMTQ8WZ04 291 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 LHX4Q969G2 390 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 TSSK6Q9BXA6 273 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 DPAGT1Q9H3H5 408 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 CNTD2Q9H8S5 307 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
MSH5-208ENST00000429846 CAB39Q9Y376 341 aaPredicted RBP12.3□□□□□ -0.44
MSH5-208ENST00000429846 WNK1Q9H4A3 2382 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 hCG_38984A0A1B0GV85 526 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 RIIAD1A6NNX1 92 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 FCN3O75636 299 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 GYPBP06028 91 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 ANXA2P07355 339 aaKnown RBP12.29□□□□□ -0.44
MSH5-208ENST00000429846 ZNF3P17036 446 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 GNALP38405 381 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 NAA10P41227 235 aaPredicted RBP12.29□□□□□ -0.44
MSH5-208ENST00000429846 IER3P46695 156 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 MIDNQ504T8 468 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 DPY19L4Q7Z388 723 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 CMTM4Q8IZR5 234 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 CSNK2A3Q8NEV1 391 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 OR1M1Q8NGA1 313 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 NPRL2Q8WTW4 380 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 RNF133Q8WVZ7 376 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 REEP6Q96HR9 211 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 INTS14Q96SY0 518 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 RASSF4Q9H2L5 321 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 MMP27Q9H306 513 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 MUC13Q9H3R2 512 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 RGCCQ9H4X1 137 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 MAGIXQ9H6Y5 334 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 PDP1Q9P0J1 537 aaPredicted RBP12.29□□□□□ -0.44
MSH5-208ENST00000429846 N6AMT1Q9Y5N5 214 aa12.29□□□□□ -0.44
MSH5-208ENST00000429846 A0A0U1RQK1 487 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 ANXA2P2A6NMY6 339 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 GPR137BO60478 399 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 MNAT1P51948 309 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 MXRA7P84157 204 aa12.28□□□□□ -0.44
MSH5-208ENST00000429846 IL5RAQ01344 420 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms