RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RPS23P62266 143 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 RTL6Q6ICC9 239 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF66Q6ZN08 573 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 LMF1Q96S06 567 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 GREB1Q4ZG55 1949 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 K7ERU9 68 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 GLSO94925 669 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 RENP00797 406 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 CDKN1BP46527 198 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 MESP2Q0VG99 397 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 NKAIN1Q4KMZ8 207 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 Q8NFD4 153 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 ADGRG7Q96K78 797 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 VAMP8Q9BV40 100 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 WNT16Q9UBV4 365 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 TGIF2-C20orf24A0A0A6YYL0 155 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 A6NIZ1 184 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 RNF212BA8MTL3 300 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM229AB2RXF0 380 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 PPP5D1E7EU14 171 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 F6UZH7 168 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 RAP1BP61224 184 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 Q6ZS52 159 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 SYT13Q7L8C5 426 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 MCEMP1Q8IX19 187 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 OR52E1Q8NGJ3 308 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF596Q8TC21 504 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 OR8D2Q9GZM6 311 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIPK2Q9H2X6 1198 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF552Q9H707 407 aaPredicted RBP12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 C14orf166Q9Y224 244 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 LSM5Q9Y4Y9 91 aaKnown RBP12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 FLVCR1Q9Y5Y0 555 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 DOCK6Q96HP0 2047 aa12.97□□□□□ -0.33
SYNGAP1-203ENST00000428982 A0A1W2PR48 441 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 PPP1R3DO95685 299 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 CRHP06850 196 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 IL9P15248 144 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 GABRG2P18507 467 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 PPP2CBP62714 309 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 PPP2CAP67775 309 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 SLC9A3R2Q15599 337 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 DCST2Q5T1A1 773 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF343Q6P1L6 599 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF429Q86V71 674 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM255BQ8WV15 326 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 METTL21AQ8WXB1 218 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 ADAD1Q96M93 576 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 LPAR2Q9HBW0 351 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 BRWD1Q9NSI6 2320 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 CCDC88CQ9P219 2028 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 DRD3P35462 400 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 BCL6P41182 706 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 CX3CR1P49238 355 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 HIST1H3AP68431 136 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 MRPS11P82912 194 aaKnown RBP12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 HHEXQ03014 270 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 DUSP8Q13202 625 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM183BQ1AE95 376 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 LCN10Q6JVE6 187 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 SYS1Q8N2H4 156 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM104Q8NE00 496 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 OR4D11Q8NGI4 311 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 DIRC2Q96SL1 478 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 C6orf106Q9H6K1 298 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 ZNF430Q9H8G1 570 aaPredicted RBP12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 SERGEFQ9UGK8 458 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 TMEM14AQ9Y6G1 99 aa12.96□□□□□ -0.33
SYNGAP1-203ENST00000428982 KIR2DS5A0A0G2JLQ3 304 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 A0A0G2JNG1 304 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 KIR2DS3K7RE56 304 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 TNFRSF10CO14798 259 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 CA11O75493 328 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 CST4P01036 141 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 GYPBP06028 91 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 FBXO45P0C2W1 286 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 GABRA3P34903 492 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 ID4P47928 161 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 KIR2DS5Q14953 304 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 RAB11BQ15907 218 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 OPN5Q6U736 354 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 MRGPREQ86SM8 312 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR5B2Q96R09 309 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 SLCO5A1Q9H2Y9 848 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 Q9N2J8 555 aa12.96□□□□□ -0.34
SYNGAP1-203ENST00000428982 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 TMEM183AQ8IXX5 376 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR56B2PQ8NGI1 322 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 OR52N4Q8NGI2 321 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 SEMA5BQ9P283 1151 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 NCDNQ9UBB6 729 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 TMEM272A0A1B0GTI8 110 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 FCMRO60667 390 aa12.95□□□□□ -0.34
SYNGAP1-203ENST00000428982 DNAJB6O75190 326 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms