RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 NDUFB11Q9NX14 153 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ASIC5Q9NY37 505 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 CSAG2Q9Y5P2 127 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 FGF7P21781 194 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF83P51522 516 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-208ENST00000428599 BAMBIQ13145 260 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 DUSP8Q13202 625 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF787Q6DD87 383 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 DGAT2L6Q6ZPD8 337 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 FA2HQ7L5A8 372 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 SSX7Q7RTT5 188 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ABI3BPQ7Z7G0 1075 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 OR2A1Q8NGT9 310 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PKMYT1Q99640 499 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PCED1AQ9H1Q7 454 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 PPIL1Q9Y3C6 166 aa8.08□□□□□ -1.12
CTNND1-208ENST00000428599 ANKUB1A6NFN9 424 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 FABP7O15540 132 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 IL5P05113 134 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 SBK2P0C263 348 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 MPLP40238 635 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 ACVR1Q04771 509 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 RPL18Q07020 188 aaKnown RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 TCTN3Q6NUS6 607 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 MFSD4AQ8N468 514 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 OR6S1Q8NH40 331 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 SPACA9Q96E40 222 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 ARHGDIGQ99819 225 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 RPP25Q9BUL9 199 aaKnown RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 PRR14Q9BWN1 585 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 E5RGE8 158 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 CDX4O14627 284 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 NME2P1O60361 137 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 MMP11P24347 488 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 BTG2P78543 158 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 SPATA46Q5T0L3 261 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 DYNC2LI1Q8TCX1 351 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 MISP3Q96FF7 219 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 GABARAPL1Q9H0R8 117 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 ST3GAL6Q9Y274 331 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 NSG2Q9Y328 171 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 METTL12A8MUP2 240 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 CCSO14618 274 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 GABRG2P18507 467 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 H3F3AP84243 136 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 DGAT2L7PQ6IED9 249 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 TRAT1Q6PIZ9 186 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 NKAIN4Q8IVV8 208 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 TMEM123Q8N131 208 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 ZFP62Q8NB50 900 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 OR2M3Q8NG83 312 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 RBM14Q96PK6 669 aaKnown RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 NIPSNAP1Q9BPW8 284 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 C20orf24Q9BUV8 137 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 OCEL1Q9H607 264 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 CLEC5AQ9NY25 188 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 HRASP01112 189 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 OR4A8P0C604 315 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 SLC25A4P12235 298 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 HIST1H1CP16403 213 aaKnown RBP8.07□□□□□ -1.12
CTNND1-208ENST00000428599 GPM6AP51674 278 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 FAM53BQ14153 422 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 HAGHQ16775 308 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 NRARPQ7Z6K4 114 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 NPEPL1Q8NDH3 523 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 SCARB1Q8WTV0 552 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 PLEKHA2Q9HB19 425 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 SHANK3Q9BYB0 1731 aa8.07□□□□□ -1.12
CTNND1-208ENST00000428599 A0A1W2PR48 441 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 FAM221AA4D161 298 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 OR2C1O95371 312 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 KIAA0141Q14154 515 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-208ENST00000428599 MOB1BQ7L9L4 216 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 SLC38A6Q8IZM9 456 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 NECAP1Q8NC96 275 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 NOXO1Q8NFA2 376 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 OR5M8Q8NGP6 311 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 C16orf52Q8NHV5 167 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 FOXB1Q99853 325 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 SEBOXQ9HB31 216 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-208ENST00000428599 HINT3Q9NQE9 182 aaKnown RBP8.06□□□□□ -1.12
CTNND1-208ENST00000428599 PLSCR3Q9NRY6 295 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 KCNMB2Q9Y691 235 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 A0A087WV62 115 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-208ENST00000428599 TGOLN2O43493 480 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 CD3EP07766 207 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 OPRM1P35372 400 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 OXA1LQ15070 435 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 ACSM5Q6NUN0 579 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 BCDIN3DQ7Z5W3 292 aaKnown RBP8.06□□□□□ -1.12
CTNND1-208ENST00000428599 CHAC2Q8WUX2 184 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
CTNND1-208ENST00000428599 MED29Q9NX70 200 aa8.06□□□□□ -1.12
CTNND1-208ENST00000428599 LILRA5A6NI73 299 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms