RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 MCUR1Q96AQ8 359 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 DDOQ99489 341 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 MYLK2Q9H1R3 596 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 CNTD2Q9H8S5 307 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 TCF7L1Q9HCS4 588 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 MED4Q9NPJ6 270 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 CENPMQ9NSP4 180 aa13.63□□□□□ -0.23
VARS-216ENST00000428445 KRT36O76013 467 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 SEMG1P04279 462 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 HSD17B1P14061 328 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 GSSP48637 474 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 HMGA2P52926 109 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 GMFBP60983 142 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 CSNK2BP67870 215 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 TSPAN31Q12999 210 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 SPATS1Q496A3 300 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 DCXRQ7Z4W1 244 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 OR9Q1Q8NGQ5 310 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 OPA3Q9H6K4 179 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 IL1RAPQ9NPH3 570 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 SIRT7Q9NRC8 400 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 ONECUT1Q9UBC0 465 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 MAGEL2Q9UJ55 1249 aa13.62□□□□□ -0.23
VARS-216ENST00000428445 RPUSD1Q9UJJ7 312 aaKnown RBP13.62□□□□□ -0.23
VARS-216ENST00000428445 BHLHE40O14503 412 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 GYPBP06028 91 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 SELLP14151 372 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 AMY2BP19961 511 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 RRM2P31350 389 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 OTX1P32242 354 aaPredicted RBP13.61□□□□□ -0.23
VARS-216ENST00000428445 KLRD1Q13241 179 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 PCK2Q16822 640 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 WDR38Q5JTN6 314 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 LDLRAD3Q86YD5 345 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 FAM216BQ8N7L0 139 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 ZSCAN4Q8NAM6 433 aaPredicted RBP13.61□□□□□ -0.23
VARS-216ENST00000428445 ZNF511Q8NB15 262 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 PROKR2Q8NFJ6 384 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 OR5T2Q8NGG2 359 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 OR4C15Q8NGM1 316 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 LRRC29Q8WV35 223 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 COPS4Q9BT78 406 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 MRPL15Q9P015 296 aaKnown RBP13.61□□□□□ -0.23
VARS-216ENST00000428445 CD300AQ9UGN4 299 aa13.61□□□□□ -0.23
VARS-216ENST00000428445 ZNF816-ZNF321PA0A0X1KG74 233 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 SLC22A31A6NKX4 558 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 TBX1O43435 398 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 FABP3P05413 133 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 SPARCP09486 303 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 CLUP10909 449 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 DDOSTP39656 456 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 RPL15P61313 204 aaKnown RBP13.6□□□□□ -0.23
VARS-216ENST00000428445 IKZF1Q13422 519 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 CDONQ4KMG0 1287 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 TEX36Q5VZQ5 186 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 PGBD2Q6P3X8 592 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 DRAM2Q6UX65 266 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 SLAMF6Q96DU3 332 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 DMRTB1Q96MA1 342 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 IL20Q9NYY1 176 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
VARS-216ENST00000428445 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.59□□□□□ -0.23
VARS-216ENST00000428445 ZNF593O00488 134 aaPredicted RBP13.59□□□□□ -0.23
VARS-216ENST00000428445 ACOT8O14734 319 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 TAF13Q15543 124 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 SAMD4BQ5PRF9 694 aaKnown RBP13.59□□□□□ -0.23
VARS-216ENST00000428445 DPY19L4Q7Z388 723 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 Q8N7P7 452 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 SLC37A3Q8NCC5 494 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 LY6G5BQ8NDX9 201 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 OR9Q2Q8NGE9 314 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 OR52L1Q8NGH7 329 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 OR8D4Q8NGM9 314 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 OR8S1Q8NH09 359 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 SGK3Q96BR1 496 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 NSMCE2Q96MF7 247 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 KCNJ15Q99712 375 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 SNTG1Q9NSN8 517 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 ZNF446Q9NWS9 450 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 KAAG1Q9UBP8 84 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
VARS-216ENST00000428445 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.58□□□□□ -0.24
VARS-216ENST00000428445 ECDO95905 644 aaPredicted RBP13.58□□□□□ -0.24
VARS-216ENST00000428445 BLVRAP53004 296 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 FAM3AP98173 230 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 EGR3Q06889 387 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 PPP1R8Q12972 351 aaKnown RBP13.58□□□□□ -0.24
VARS-216ENST00000428445 TEX30Q5JUR7 227 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 WDR82Q6UXN9 313 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 SLC16A9Q7RTY1 509 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 ZDHHC21Q8IVQ6 265 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 OR1M1Q8NGA1 313 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 ELAC2Q9BQ52 826 aaKnown RBP13.58□□□□□ -0.24
VARS-216ENST00000428445 DPAGT1Q9H3H5 408 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 SP140LQ9H930 580 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 C14orf119Q9NWQ9 140 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 ZNF319Q9P2F9 582 aa13.58□□□□□ -0.24
VARS-216ENST00000428445 SIGLEC9Q9Y336 463 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms