RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 MTCP1P56278 107 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 EIF5AP63241 154 aaKnown RBP9.52□□□□□ -0.89
TCOF1-204ENST00000427724 PDZK1IP1Q13113 114 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 DYRK1AQ13627 763 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 PEA15Q15121 130 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 SFRP5Q5T4F7 317 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 DUSP18Q8NEJ0 188 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 SDHCQ99643 169 aaPredicted RBP9.52□□□□□ -0.89
TCOF1-204ENST00000427724 CHD5Q8TDI0 1954 aa9.52□□□□□ -0.89
TCOF1-204ENST00000427724 CNOT4O95628 575 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ACTL6AO96019 429 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SNRNP70P08621 437 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 AKR1C4P17516 323 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ARR3P36575 388 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 RPL18Q07020 188 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 AADACL4Q5VUY2 407 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 TMEM205Q6UW68 189 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 MAMSTRQ6ZN01 415 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 DCXRQ7Z4W1 244 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 PPP1R32Q7Z5V6 425 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 UBE3DQ7Z6J8 389 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SLC38A9Q8NBW4 561 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SPSB2Q99619 263 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ARHGDIGQ99819 225 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 EIF5A2Q9GZV4 153 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ENY2Q9NPA8 101 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ZMIZ1Q9ULJ6 1067 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CYR61O00622 381 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SIGLEC5O15389 551 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 HLA-HP01893 362 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 LAP3P28838 519 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF616Q08AN1 781 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CNN3Q15417 329 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 C1orf87Q8N0U7 546 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 OR2L13Q8N349 312 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 OR13C9Q8NGT0 318 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CCL17Q92583 94 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 FOXB1Q99853 325 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CYSLTR2Q9NS75 346 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 KIF25Q9UIL4 384 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SZT2Q5T011 3432 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CEP295Q9C0D2 2601 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF646O15015 1829 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 IL2RGP31785 369 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 MEP1BQ16820 701 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 LGALSLQ3ZCW2 172 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 TUSC5Q8IXB3 177 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 C17orf47Q8NEP4 570 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 OR11H7Q8NGC8 314 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 OR51D1Q8NGF3 324 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 DLL4Q9NR61 685 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 GNG12Q9UBI6 72 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 IGHV1-45A0A0A0MS14 117 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 NKX6-3A6NJ46 265 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 TBX19O60806 448 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 PTHLHP12272 177 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CCR9P51686 369 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SLC37A1P57057 533 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 CD300LDQ6UXZ3 194 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 THSD4Q6ZMP0 1018 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 DPY19L2P2Q6ZN68 376 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 OR10R2Q8NGX6 335 aa9.51□□□□□ -0.89
TCOF1-204ENST00000427724 DVL3Q92997 716 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ZMAT3Q9HA38 289 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ING1Q9UK53 422 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF346Q9UL40 294 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 LSM2Q9Y333 95 aaKnown RBP9.51□□□□□ -0.89
TCOF1-204ENST00000427724 SNRNP200O75643 2136 aaKnown RBP9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ENSAO43768 121 aaKnown RBP9.5□□□□□ -0.89
TCOF1-204ENST00000427724 NFYBP25208 207 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ACTBP60709 375 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ACTG1P63261 375 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 GSG1Q2KHT4 349 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 LIPNQ5VXI9 398 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 FAM122BQ7Z309 247 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 CMTM4Q8IZR5 234 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 OR5D14Q8NGL3 314 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 RAB40AQ8WXH6 277 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ABHD1Q96SE0 405 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 LPAR2Q9HBW0 351 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 TINAGQ9UJW2 476 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 RHBDD3Q9Y3P4 386 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 MYLKQ15746 1914 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ZNF254O75437 659 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 CRYBA1P05813 215 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 CD53P19397 219 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 RPS27AP62979 156 aaKnown RBP9.5□□□□□ -0.89
TCOF1-204ENST00000427724 UBA52P62987 128 aaKnown RBP9.5□□□□□ -0.89
TCOF1-204ENST00000427724 MFSD8Q8NHS3 518 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 LRFN5Q96NI6 719 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 SLC5A7Q9GZV3 580 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 SULT1B1O43704 296 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 SFTPBP07988 381 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ATF1P18846 271 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 ACHEP22303 614 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 MAGEB1P43366 347 aa9.5□□□□□ -0.89
TCOF1-204ENST00000427724 MRPS10P82664 201 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms