RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SGCAQ16586 387 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ODF4Q2M2E3 257 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 HES5Q5TA89 166 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 OTPQ5XKR4 325 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ABHD12BQ7Z5M8 362 aaPredicted RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 NRARPQ7Z6K4 114 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CCDC54Q8NEL0 328 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 OR51A4Q8NGJ6 313 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 OR13C3Q8NGS6 347 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 OR5H6Q8NGV6 325 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 LGALS14Q8TCE9 139 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CHAC2Q8WUX2 184 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 PBOV1Q9GZY1 135 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 EMC7Q9NPA0 242 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 SLC17A5Q9NRA2 495 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 RBFOX1Q9NWB1 397 aaKnown RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 RHBDL2Q9NX52 303 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 NPAP1Q9NZP6 1156 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CRIM1Q9NZV1 1036 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ASH2LQ9UBL3 628 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 DCHS2Q6V1P9 2916 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 A0A096LPE4 126 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 A0A1W2PPZ6 126 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CENPXA8MT69 81 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 RPL36A-HNRNPH2H7BZ11 118 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 GSTZ1O43708 216 aaPredicted RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 MAS1P04201 325 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 IGFBP3P17936 291 aaPredicted RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ADRA2CP18825 462 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CDAP32320 146 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 MNDAP41218 407 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 MAGEB1P43366 347 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 KIR2DL3P43628 341 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 MAP2K3P46734 347 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 SORDQ00796 357 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 TAB1Q15750 504 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 HIKESHIQ53FT3 197 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 FAM27BQ5VT28 67 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 CADM3Q8N126 398 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 NKAIN3Q8N8D7 197 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 STEAP2Q8NFT2 490 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 OR10AC1Q8NH08 325 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ENKURQ8TC29 256 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 ITPKCQ96DU7 683 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 DDX28Q9NUL7 540 aaKnown RBP13.59□□□□□ -0.23
SHOX2-202ENST00000425436 NDRG3Q9UGV2 375 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
SHOX2-202ENST00000425436 PTPN13Q12923 2485 aa13.58□□□□□ -0.23
SHOX2-202ENST00000425436 CELSR2Q9HCU4 2923 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 PKDREJQ9NTG1 2253 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 TRAV8-7A0A075B6U6 113 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 LOC107986453A0A1B0GWG9 222 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 SLC17A2O00624 439 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 PLA2G10O15496 165 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 RFX2P48378 723 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 TGFBR3Q03167 851 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 SERPINA12Q8IW75 414 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 DUSP18Q8NEJ0 188 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 OR10S1Q8NGN2 331 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 OR1K1Q8NGR3 316 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 HAVCR1Q96D42 359 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
SHOX2-202ENST00000425436 C11orf54Q9H0W9 315 aaPredicted RBP13.58□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF275Q9NSD4 429 aaPredicted RBP13.58□□□□□ -0.24
SHOX2-202ENST00000425436 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
SHOX2-202ENST00000425436 A0A1B0GVI7 797 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 LYRM1O43325 122 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 SYT7O43581 403 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 WNT11O96014 354 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 THBDP07204 575 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ERCC1P07992 297 aaPredicted RBP13.57□□□□□ -0.24
SHOX2-202ENST00000425436 HIST1H3AP68431 136 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ECH1Q13011 328 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 RAB11BQ15907 218 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 NRN1LQ496H8 165 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 HIST2H3PS2Q5TEC6 136 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF57Q68EA5 555 aaPredicted RBP13.57□□□□□ -0.24
SHOX2-202ENST00000425436 PLET1Q6UQ28 207 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 HIST2H3AQ71DI3 136 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 CMTM4Q8IZR5 234 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ACBD4Q8NC06 268 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 OR5D14Q8NGL3 314 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 BCL2L2Q92843 193 aaPredicted RBP13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ORAI1Q96D31 301 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ABHD1Q96SE0 405 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 SPOCK3Q9BQ16 436 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 NEURL2Q9BR09 285 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 ZNF416Q9BWM5 594 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 HECTD1Q9ULT8 2610 aa13.57□□□□□ -0.24
SHOX2-202ENST00000425436 CENPEQ02224 2701 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 RER1O15258 196 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 CST2P09228 141 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 ACSM4P0C7M7 580 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 COX6B1P14854 86 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 B4GALT1P15291 398 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 SPNP16150 400 aa13.56□□□□□ -0.24
SHOX2-202ENST00000425436 PCBD1P61457 104 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms