RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 OR8S1Q8NH09 359 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 MRPL24Q96A35 216 aaKnown RBP8.69□□□□□ -1.02
CD44-207ENST00000425428 HAVCR1Q96D42 359 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 MARS2Q96GW9 593 aaKnown RBP8.69□□□□□ -1.02
CD44-207ENST00000425428 PAPOLGQ9BWT3 736 aaKnown RBP8.69□□□□□ -1.02
CD44-207ENST00000425428 TMEM100Q9NV29 134 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 NDUFA13Q9P0J0 144 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 SLC7A11Q9UPY5 501 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 PMF1-BGLAPU3KQ54 211 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 PKDREJQ9NTG1 2253 aa8.69□□□□□ -1.02
CD44-207ENST00000425428 LOC100506127A0A0U1RQW1 187 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 CD300LBA8K4G0 201 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 DEFB108AA8MXU0 73 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 AIREO43918 545 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 CLDN1O95832 211 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 LALBAP00709 142 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 RNF224P0DH78 156 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 ZNF250P15622 560 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 CCL1P22362 96 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 SSTR2P30874 369 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 SOX2P48431 317 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 PSMD7P51665 324 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 NKX6-1P78426 367 aaPredicted RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 FAM3AP98173 230 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 HLXQ14774 488 aaPredicted RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 HSD17B12Q53GQ0 312 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 CLVS2Q5SYC1 327 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 RDH10Q8IZV5 341 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 MUC15Q8N387 334 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 SPERTQ8NA61 448 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 OR13G1Q8NGZ3 307 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 TMEM106AQ96A25 262 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 DIRC2Q96SL1 478 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 CLEC4MQ9H2X3 399 aaPredicted RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 UBTD1Q9HAC8 227 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 ZNF275Q9NSD4 429 aaPredicted RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 MRPL15Q9P015 296 aaKnown RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 PLEKHB1Q9UF11 243 aaPredicted RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 PURGQ9UJV8 347 aaKnown RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 FZR1Q9UM11 496 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 MPC1Q9Y5U8 109 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 ICE1Q9Y2F5 2266 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 PLCE1Q9P212 2302 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 SPTAN1Q13813 2472 aaKnown RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 hCG_38984A0A1B0GV85 526 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 IQCF6A8MYZ5 107 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 H3BSH0 61 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 M0R233 179 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 PDCD5O14737 125 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 HS3ST1O14792 307 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 TPD52L2O43399 206 aaKnown RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 IGHV3-13P01766 116 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 RAB3AP20336 220 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 KITLGP21583 273 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 GP2P55259 537 aaKnown RBP8.68□□□□□ -1.02
CD44-207ENST00000425428 TLE4Q04727 773 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 OR8G1Q15617 311 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 OR2T2Q6IF00 324 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 BHLHE23Q8NDY6 225 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 OR56B2PQ8NGI1 322 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 OR13F1Q8NGS4 319 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 RPS4Y2Q8TD47 263 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 TMEM171Q8WVE6 324 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 PIGCQ92535 297 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 PPP1R14AQ96A00 147 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 FGGYQ96C11 551 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 PGLYRP3Q96LB9 341 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 KCTD7Q96MP8 289 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 MICU1Q9BPX6 476 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 SYT3Q9BQG1 590 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 TMEM204Q9BSN7 226 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 MS4A5Q9H3V2 200 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 BATF3Q9NR55 127 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 C14orf119Q9NWQ9 140 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 TAAR3PQ9P1P4 343 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 ZDHHC8Q9ULC8 765 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 V9GYS6 101 aa8.68□□□□□ -1.02
CD44-207ENST00000425428 DOPEY2Q9Y3R5 2298 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 RELNP78509 3460 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 TRDV1A0A1B0GX56 115 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 MEGF11A6BM72 1044 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 GMDSO60547 372 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 NRASP01111 189 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 TFAP2AP05549 437 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 PRKACBP22694 351 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 ERVS71-1P61550 626 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 RPS25P62851 125 aaKnown RBP8.67□□□□□ -1.02
CD44-207ENST00000425428 PSG7Q13046 419 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 DOC2BQ14184 412 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 OR8B8Q15620 311 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 PLCXD3Q63HM9 321 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 C20orf204Q6ZNR8 217 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 OR5AS1Q8N127 324 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 OR8G5Q8NG78 346 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 PIGTQ969N2 578 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 OR14A2Q96R54 314 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 CHCHD6Q9BRQ6 235 aa8.67□□□□□ -1.02
CD44-207ENST00000425428 EGLN1Q9GZT9 426 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms