RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SVEP1Q4LDE5 3571 aa4.79□□□□□ -1.64
LINC00458-201ENST00000423442 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TRBV4-1A0A0J9YWV2 114 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TMEM129A0AVI4 362 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 HMX3A6NHT5 357 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 SURF4O15260 269 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 PPIHO43447 177 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 LY6HO94772 140 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 COX5BP10606 129 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF250P15622 560 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF23P17027 643 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 GIFP27352 417 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 CDKN2AP42771 156 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ALDH3B1P43353 468 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 OMPP47874 163 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 RGS6P49758 472 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 PPP1CBP62140 327 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 MRPS11P82912 194 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 SLC3A1Q07837 685 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TRAP1Q12931 704 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TSPAN31Q12999 210 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ECH1Q13011 328 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 AQP6Q13520 282 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 KRR1Q13601 381 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TAF13Q15543 124 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TMEM249Q2WGJ8 235 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ALKBH6Q3KRA9 238 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 C6orf52Q5T4I8 152 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF774Q6NX45 483 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 C1orf94Q6P1W5 598 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 LEG1Q6P5S2 330 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TMEM65Q6PI78 240 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 DNM1P46Q6ZS02 220 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 MYPOPQ86VE0 399 aaPredicted RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ANKRD13BQ86YJ7 626 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 WDFY1Q8IWB7 410 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 OR8H2Q8N162 312 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 LRRC75AQ8NAA5 344 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 FGFBP3Q8TAT2 258 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 RAB1CQ92928 201 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 PTP4A1Q93096 173 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 POM121L2Q96KW2 1035 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF75AQ96N20 296 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 CHCHD6Q9BRQ6 235 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 NUAK2Q9H093 628 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 TPK1Q9H3S4 243 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 MAGIXQ9H6Y5 334 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 CHODLQ9H9P2 273 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 POLE4Q9NR33 117 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 ZNF224Q9NZL3 707 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 AASSQ9UDR5 926 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 IL20RAQ9UHF4 553 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 KCNS2Q9ULS6 477 aa4.78□□□□□ -1.64
LINC00458-201ENST00000423442 PRPF19Q9UMS4 504 aaKnown RBP4.78□□□□□ -1.64
LINC00458-201ENST00000423442 DYSFO75923 2080 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 LOC100509620A0A075B734 347 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 OR6C6A6NF89 314 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 C17orf100A8MU93 164 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 H7C1C5 153 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 ARPC3O15145 178 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 TIMM8AO60220 97 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 DOK2O60496 412 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 LMX1BO60663 402 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 E2F6O75461 281 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 ATP5HO75947 161 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 PPP1R3DO95685 299 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 TXNDC12O95881 172 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 CLPTM1O96005 669 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 CST1P01037 141 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 IFNGP01579 166 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 IGHV3-13P01766 116 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 MMP7P09237 267 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 PAICSP22234 425 aaKnown RBP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 ACHEP22303 614 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 COL8A2P25067 703 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 FMO3P31513 532 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 CRYBB2P43320 205 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 GPR6P46095 362 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 HTR5AP47898 357 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 BLVRAP53004 296 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 LCN6P62502 163 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 COX10Q12887 443 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 SCGB2A2Q13296 93 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 GK3PQ14409 553 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 MAD2L1BPQ15013 274 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 TSTQ16762 297 aaKnown RBP4.77□□□□□ -1.65
LINC00458-201ENST00000423442 MICAQ29983 383 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 DNAL1Q4LDG9 190 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 SPATA46Q5T0L3 261 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 OR2T5Q6IEZ7 315 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 SLC27A4Q6P1M0 643 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 RINLQ6ZS11 566 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 IL17RELQ6ZVW7 336 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 TRPM8Q7Z2W7 1104 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 LRP11Q86VZ4 500 aa4.77□□□□□ -1.65
LINC00458-201ENST00000423442 ZNF584Q8IVC4 421 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms