RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ZNF786Q8N393 782 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 PRSS35Q8N3Z0 413 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 OR8G5Q8NG78 346 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 OR51E1Q8TCB6 317 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 SGCDQ92629 289 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 PELI1Q96FA3 418 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 MRPL48Q96GC5 212 aaKnown RBP7.9□□□□□ -1.14
PDGFC-202ENST00000422544 MYCBPQ99417 103 aaPredicted RBP7.9□□□□□ -1.14
PDGFC-202ENST00000422544 FOXC2Q99958 501 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 RGCCQ9H4X1 137 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 Q9H521 79 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 GPR84Q9NQS5 396 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 CYSLTR2Q9NS75 346 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 FKBP14Q9NWM8 211 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 UBAP1Q9NZ09 502 aa7.9□□□□□ -1.14
PDGFC-202ENST00000422544 NUFIP1Q9UHK0 495 aaKnown RBP7.9□□□□□ -1.14
PDGFC-202ENST00000422544 EXOSC1Q9Y3B2 195 aaKnown RBP7.9□□□□□ -1.14
PDGFC-202ENST00000422544 ANK2Q01484 3957 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 ARFGEF3Q5TH69 2177 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 A0A0U1RQV5 110 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 hCG_38984A0A1B0GV85 526 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 E9PI62 339 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 H0YL77 283 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 P2RY10O00398 339 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 SSX4O60224 188 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 HPXP02790 462 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 HLA-DPB1P04440 258 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 CDK1P06493 297 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 ERCC1P07992 297 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 CCDC159P0C7I6 412 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 CFL1P23528 166 aaKnown RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 EFNA4P52798 201 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 GBX2P52951 348 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 NANOS3P60323 173 aaKnown RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 CCL8P80075 99 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 TNK1Q13470 666 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 MED21Q13503 144 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 WDR38Q5JTN6 314 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 TMPRSS11AQ6ZMR5 421 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 COMMD2Q86X83 199 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 RDH10Q8IZV5 341 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 KLHL36Q8N4N3 616 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 OR2Z1Q8NG97 314 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 OR56B2PQ8NGI1 322 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 OR13G1Q8NGZ3 307 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 OR2G2Q8NGZ5 317 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 NEU4Q8WWR8 484 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 GATAD2BQ8WXI9 593 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 MYDGFQ969H8 173 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 FAM71F1Q96KD3 344 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 SLC30A2Q9BRI3 323 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 OPA3Q9H6K4 179 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 MOB1AQ9H8S9 216 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 TMEM100Q9NV29 134 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 PAK1IP1Q9NWT1 392 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 FRRS1LQ9P0K9 344 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 ERVK-18Q9QC07 812 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 CGGBP1Q9UFW8 167 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 ZDHHC8Q9ULC8 765 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 CAB39Q9Y376 341 aaPredicted RBP7.89□□□□□ -1.15
PDGFC-202ENST00000422544 TPRKBQ9Y3C4 175 aa7.89□□□□□ -1.15
PDGFC-202ENST00000422544 A0A1B0GTI1 187 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 ANKRD30BLA7E2S9 258 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 LYNX1G3V0Z9 82 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 H3BSH0 61 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 IGLV3-1P01715 115 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 HTR1AP08908 422 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 LYNX1P0DP58 116 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 CA6P23280 308 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 CRHBPP24387 322 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 ACKR3P25106 362 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 DDOSTP39656 456 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 KIR3DL2P43630 455 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 GTF2A1P52655 376 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 SLC35A2P78381 396 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 TNFAIP6P98066 277 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 ALKBH1Q13686 389 aaKnown RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 PCGF3Q3KNV8 242 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 SPRNQ5BIV9 151 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 ZMAT1Q5H9K5 638 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 Q5PR19 223 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 RBM48Q5RL73 367 aaKnown RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 FDX2Q6P4F2 183 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 KLBQ86Z14 1044 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 EGFL6Q8IUX8 553 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 OR10AD1Q8NGE0 317 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 ELMOD3Q96FG2 381 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 CXXC4Q9H2H0 198 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 DUSP21Q9H596 190 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 PPP1R3EQ9H7J1 279 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 BARX1Q9HBU1 254 aaPredicted RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 DECR2Q9NUI1 292 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 BABAM2Q9NXR7 383 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 NKIRAS2Q9NYR9 191 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 MRPL15Q9P015 296 aaKnown RBP7.88□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF391Q9UJN7 358 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 RHBDD3Q9Y3P4 386 aa7.88□□□□□ -1.15
PDGFC-202ENST00000422544 IGHV3-64DA0A0J9YX35 117 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms