RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 DUX4L5P0CJ88 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DUX4L6P0CJ89 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DUX4L7P0CJ90 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 THEM4Q5T1C6 240 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 RHBDD2Q6NTF9 364 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DTWD2Q8NBA8 298 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 ELP5Q8TE02 316 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 OR6C1Q96RD1 312 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 WDR77Q9BQA1 342 aaPredicted RBP13.96□□□□□ -0.17
CDH1-202ENST00000422392 DNTTIP1Q9H147 329 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 DUX4Q9UBX2 424 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 SHPKQ9UHJ6 478 aa13.96□□□□□ -0.17
CDH1-202ENST00000422392 NPIPB13A6NJU9 1138 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 NPIPB4C9JG80 1138 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 TRAF3IP2O43734 574 aaPredicted RBP13.95□□□□□ -0.18
CDH1-202ENST00000422392 IGHG1P01857 330 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 PTGDSP41222 190 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 P2RY4P51582 365 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 GABREP78334 506 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 NKAIN1Q4KMZ8 207 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 ZSCAN4Q8NAM6 433 aaPredicted RBP13.95□□□□□ -0.18
CDH1-202ENST00000422392 TERB2Q8NHR7 220 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 PAQR8Q8TEZ7 354 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 TMEM59Q9BXS4 323 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 A0A1W2PNV4 684 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 MSGN1A6NI15 193 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 GPR31O00270 319 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 SRFP11831 508 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 HIST1H1DP16402 221 aaKnown RBP13.95□□□□□ -0.18
CDH1-202ENST00000422392 IGFBP4P22692 258 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 CX3CR1P49238 355 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 SRSF3P84103 164 aaKnown RBP13.95□□□□□ -0.18
CDH1-202ENST00000422392 C1QL2Q7Z5L3 287 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 TMEM17Q86X19 198 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 PIK3IP1Q96FE7 263 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 LIN37Q96GY3 246 aaPredicted RBP13.95□□□□□ -0.18
CDH1-202ENST00000422392 RNF126Q9BV68 326 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 ST6GALNAC5Q9BVH7 336 aa13.95□□□□□ -0.18
CDH1-202ENST00000422392 NKX6-2Q9C056 277 aaPredicted RBP13.95□□□□□ -0.18
CDH1-202ENST00000422392 IGKV1-9A0A0C4DH69 117 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 QDPRP09417 244 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 GPR85P60893 370 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 LCN10Q6JVE6 187 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 FAHD2BQ6P2I3 314 aaPredicted RBP13.94□□□□□ -0.18
CDH1-202ENST00000422392 TMEM200AQ86VY9 491 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 DTX1Q86Y01 620 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 ZNF283Q8N7M2 679 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 PHYHIPLQ96FC7 376 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 FAHD2AQ96GK7 314 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 ZNF768Q9H5H4 540 aaKnown RBP13.94□□□□□ -0.18
CDH1-202ENST00000422392 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 AKIRIN1Q9H9L7 192 aaPredicted RBP13.94□□□□□ -0.18
CDH1-202ENST00000422392 SDHAF3Q9NRP4 125 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 MTCH2Q9Y6C9 303 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 SUMO3P55854 103 aaPredicted RBP13.94□□□□□ -0.18
CDH1-202ENST00000422392 ARFRP1Q13795 201 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 TMEM128Q5BJH2 165 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 PRAMEF20Q5VT98 475 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 TMEM88Q6PEY1 159 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 CLEC18BQ6UXF7 455 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 CADM4Q8NFZ8 388 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 NUBPLQ8TB37 319 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 TMED6Q8WW62 240 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 MARC2Q969Z3 335 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 MRGPRX4Q96LA9 322 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 AIFM2Q9BRQ8 373 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 TGIF2Q9GZN2 237 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 PNRC2Q9NPJ4 139 aaKnown RBP13.94□□□□□ -0.18
CDH1-202ENST00000422392 SEMA5BQ9P283 1151 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 WIF1Q9Y5W5 379 aa13.94□□□□□ -0.18
CDH1-202ENST00000422392 DHPSP49366 369 aaPredicted RBP13.93□□□□□ -0.18
CDH1-202ENST00000422392 ZNF169Q14929 603 aaPredicted RBP13.93□□□□□ -0.18
CDH1-202ENST00000422392 TMEM176BQ3YBM2 270 aaPredicted RBP13.93□□□□□ -0.18
CDH1-202ENST00000422392 SLC39A1Q9NY26 324 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 OR5AC2Q9NZP5 309 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 ACTL6AO96019 429 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 ADCYAP1P18509 176 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 SUPT4H1P63272 117 aaKnown RBP13.93□□□□□ -0.18
CDH1-202ENST00000422392 SGCAQ16586 387 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 GUCA2BQ16661 112 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 CARFQ8N187 725 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 GTPBP8Q8N3Z3 284 aaPredicted RBP13.93□□□□□ -0.18
CDH1-202ENST00000422392 FANCFQ9NPI8 374 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 MYOTQ9UBF9 498 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 COL6A3P12111 3177 aa13.93□□□□□ -0.18
CDH1-202ENST00000422392 SCRG1O75711 98 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 F12P00748 615 aaPredicted RBP13.92□□□□□ -0.18
CDH1-202ENST00000422392 CHRM2P08172 466 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 ZNF43P17038 809 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 ANKRD55Q3KP44 614 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 WDR74Q6RFH5 385 aaPredicted RBP13.92□□□□□ -0.18
CDH1-202ENST00000422392 OR51F2Q8NH61 342 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 KCNG3Q8TAE7 436 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 OR10C1Q96KK4 312 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 PIGMQ9H3S5 423 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 TMEM231Q9H6L2 316 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 FRYQ5TBA9 3013 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 ABCD4O14678 606 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms