RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 PCDHB10Q9UN67 800 aa22.2■■□□□ 1.14
CDK9-202ENST00000421939 ATRQ13535 2644 aa22.2■■□□□ 1.14
CDK9-202ENST00000421939 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.19■■□□□ 1.14
CDK9-202ENST00000421939 PLPP2O43688 288 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 ZNF254O75437 659 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 PTBP3O95758 552 aaKnown RBP22.19■■□□□ 1.14
CDK9-202ENST00000421939 IFNA2P01563 188 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 IRF2P14316 349 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 HTR1FP30939 366 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 PQLC1Q8N2U9 271 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 OR51G2Q8NGK0 314 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 OR11L1Q8NGX0 322 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 UFSP2Q9NUQ7 469 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 CLN6Q9NWW5 311 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 IMPAD1Q9NX62 359 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 ZNF391Q9UJN7 358 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 MXRA5Q9NR99 2828 aa22.19■■□□□ 1.14
CDK9-202ENST00000421939 CUBNO60494 3623 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 PHYHO14832 338 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 FAM20BO75063 409 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 DCTDP32321 178 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 RIDAP52758 137 aaKnown RBP22.18■■□□□ 1.14
CDK9-202ENST00000421939 MZT1Q08AG7 82 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 OR8B8Q15620 311 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 MPPED2Q15777 294 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 ZNF322Q6U7Q0 402 aaPredicted RBP22.18■■□□□ 1.14
CDK9-202ENST00000421939 PLPP7Q8NBV4 271 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 CSNK2A3Q8NEV1 391 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 C9orf16Q9BUW7 83 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 FN3KRPQ9HA64 309 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 FAM206AQ9NX38 181 aa22.18■■□□□ 1.14
CDK9-202ENST00000421939 ACOD1A6NK06 481 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 ZNF670-ZNF695F2Z2N8 137 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 ZNF205O95201 554 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 CXCR4P61073 352 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 POU4F2Q12837 409 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 SNCBQ16143 134 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 ZNF829Q3KNS6 432 aaPredicted RBP22.17■■□□□ 1.14
CDK9-202ENST00000421939 FTMTQ8N4E7 242 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 OR8S1Q8NH09 359 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 HRASLS5Q96KN8 279 aa22.17■■□□□ 1.14
CDK9-202ENST00000421939 PAPOLGQ9BWT3 736 aaKnown RBP22.17■■□□□ 1.14
CDK9-202ENST00000421939 PATZ1Q9HBE1 687 aaKnown RBP22.17■■□□□ 1.14
CDK9-202ENST00000421939 TMEM269A0A1B0GVZ9 245 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 CEACAM18A8MTB9 384 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 FSTL3O95633 263 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 ZIK1Q3SY52 487 aaPredicted RBP22.16■■□□□ 1.14
CDK9-202ENST00000421939 RFKQ969G6 155 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 EME1Q96AY2 570 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 LYZL4Q96KX0 146 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 G6PC2Q9NQR9 355 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 C14orf119Q9NWQ9 140 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 RHBDD3Q9Y3P4 386 aa22.16■■□□□ 1.14
CDK9-202ENST00000421939 A0A0G2JMP0 313 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 A0A0X1KG70 313 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 F5H0A9 414 aaPredicted RBP22.15■■□□□ 1.14
CDK9-202ENST00000421939 SRP14P37108 136 aaKnown RBP22.15■■□□□ 1.14
CDK9-202ENST00000421939 GNALP38405 381 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 LCN2P80188 198 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 TMED1Q13445 227 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 FAM201AQ5SY85 155 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 OR4M2Q8NGB6 313 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 TRUB1Q8WWH5 349 aaKnown RBP22.15■■□□□ 1.14
CDK9-202ENST00000421939 STMN2Q93045 179 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 TMEM165Q9HC07 324 aa22.15■■□□□ 1.14
CDK9-202ENST00000421939 PPIAL4EA0A075B759 164 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 A0A0U1RQV5 110 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 A6NLC8 198 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 E9PQ18 207 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 PPIAL4DF5H284 164 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 FOXH1O75593 365 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 APOL3O95236 402 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 PNPP00491 289 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 GRPP07492 148 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 PPIAL4FP0DN26 164 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 ACKR3P25106 362 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 EGR3Q06889 387 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 MBOAT4Q96T53 435 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 APOL4Q9BPW4 351 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 PBOV1Q9GZY1 135 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 RNF7Q9UBF6 113 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 PPIAL4AQ9Y536 164 aa22.14■■□□□ 1.13
CDK9-202ENST00000421939 BAG2O95816 211 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 MFGE8Q08431 387 aaPredicted RBP22.13■■□□□ 1.13
CDK9-202ENST00000421939 ZNF404Q494X3 552 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 FAHD2BQ6P2I3 314 aaPredicted RBP22.13■■□□□ 1.13
CDK9-202ENST00000421939 ZBTB49Q6ZSB9 765 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 UBE2FQ969M7 185 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 FAHD2AQ96GK7 314 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 TBX5Q99593 518 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 TMEM246Q9BRR3 403 aa22.13■■□□□ 1.13
CDK9-202ENST00000421939 NUFIP1Q9UHK0 495 aaKnown RBP22.13■■□□□ 1.13
CDK9-202ENST00000421939 MRM2Q9UI43 246 aaKnown RBP22.13■■□□□ 1.13
CDK9-202ENST00000421939 ANXA2P2A6NMY6 339 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 MAGEB4O15481 346 aaPredicted RBP22.12■■□□□ 1.13
CDK9-202ENST00000421939 OR2T7P0C7T2 308 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 RPS2P15880 293 aaKnown RBP22.12■■□□□ 1.13
CDK9-202ENST00000421939 ZFP36P26651 326 aaKnown RBP22.12■■□□□ 1.13
CDK9-202ENST00000421939 ATP6V1E1P36543 226 aa22.12■■□□□ 1.13
CDK9-202ENST00000421939 SEC61A1P61619 476 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms