RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 LYZL4Q96KX0 146 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 ADAT1Q9BUB4 502 aaKnown RBP13.36□□□□□ -0.27
BRAT1-202ENST00000421712 MOB1AQ9H8S9 216 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 MRPL15Q9P015 296 aaKnown RBP13.36□□□□□ -0.27
BRAT1-202ENST00000421712 PPP1R3CQ9UQK1 317 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 MYRFQ9Y2G1 1151 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 RRP15Q9Y3B9 282 aaKnown RBP13.36□□□□□ -0.27
BRAT1-202ENST00000421712 CACNG2Q9Y698 323 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 VPS13CQ709C8 3753 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 CELSR1Q9NYQ6 3014 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 F8P00451 2351 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-202ENST00000421712 A0A0U1RQV5 110 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 IRGMA1A4Y4 181 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 CLDN25C9JDP6 229 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 H0YJX3 145 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 J3QRE1 110 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 GMDSO60547 372 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 PSMB10P40306 273 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 MAP2K3P46734 347 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 OR12D2P58182 307 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 ACTA2P62736 377 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 ACTG2P63267 376 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 SLC3A1Q07837 685 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 RIN1Q13671 783 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 SNCBQ16143 134 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 ODF4Q2M2E3 257 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 KCTD20Q7Z5Y7 419 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 THAP5Q7Z6K1 395 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 PEG10Q86TG7 708 aaKnown RBP13.35□□□□□ -0.27
BRAT1-202ENST00000421712 FTMTQ8N4E7 242 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 OR8S1Q8NH09 359 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 DVL3Q92997 716 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-202ENST00000421712 TIMD4Q96H15 378 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 SMR3AQ99954 134 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 SOX7Q9BT81 388 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 ALG8Q9BVK2 526 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 PAPOLGQ9BWT3 736 aaKnown RBP13.35□□□□□ -0.27
BRAT1-202ENST00000421712 NARFLQ9H6Q4 476 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 GPR84Q9NQS5 396 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 ACOXLQ9NUZ1 547 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 NUFIP1Q9UHK0 495 aaKnown RBP13.35□□□□□ -0.27
BRAT1-202ENST00000421712 SLC22A13Q9Y226 551 aa13.35□□□□□ -0.27
BRAT1-202ENST00000421712 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 FAM20BO75063 409 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 MTRF1O75570 445 aaKnown RBP13.34□□□□□ -0.27
BRAT1-202ENST00000421712 RP2O75695 350 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 TTRP02766 147 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 MVKQ03426 396 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 LOXL1Q08397 574 aaPredicted RBP13.34□□□□□ -0.27
BRAT1-202ENST00000421712 MZT1Q08AG7 82 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 GALEQ14376 348 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 CDONQ4KMG0 1287 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 ZNF684Q5T5D7 378 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 AVPI1Q5T686 147 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 ELMOD2Q8IZ81 293 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 PIGCQ92535 297 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 RORBQ92753 470 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 RAB1CQ92928 201 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 C4orf36Q96KX1 117 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 G6PC2Q9NQR9 355 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 INPP5EQ9NRR6 644 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 MRPS18AQ9NVS2 196 aaKnown RBP13.34□□□□□ -0.27
BRAT1-202ENST00000421712 RHBDD3Q9Y3P4 386 aa13.34□□□□□ -0.27
BRAT1-202ENST00000421712 DYSFO75923 2080 aa13.33□□□□□ -0.27
BRAT1-202ENST00000421712 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 LRP5LA4QPB2 252 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 P2RY10O00398 339 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 SRSF10O75494 262 aaKnown RBP13.33□□□□□ -0.28
BRAT1-202ENST00000421712 GRPP07492 148 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 CHN2P52757 468 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 RIPPLY1Q0D2K3 151 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 OR8B8Q15620 311 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 CLEC9AQ6UXN8 241 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 IZUMO2Q6UXV1 221 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 BIVMQ86UB2 503 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 MOGAT3Q86VF5 341 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 CATSPERDQ86XM0 798 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 KLBQ86Z14 1044 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 SPERTQ8NA61 448 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 BPIFB6Q8NFQ5 453 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 ZNF420Q8TAQ5 688 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-202ENST00000421712 HIST1H2AAQ96QV6 131 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 GSX1Q9H4S2 264 aaPredicted RBP13.33□□□□□ -0.28
BRAT1-202ENST00000421712 GCM1Q9NP62 436 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 TMEM106BQ9NUM4 274 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 UFSP2Q9NUQ7 469 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 C14orf119Q9NWQ9 140 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 CHCHD3Q9NX63 227 aaKnown RBP13.33□□□□□ -0.28
BRAT1-202ENST00000421712 ERVK13-1Q9NX77 482 aa13.33□□□□□ -0.28
BRAT1-202ENST00000421712 A0A1B0GVI7 797 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 ISPDA4D126 451 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 A6NLC8 198 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 ZNF850A8MQ14 1090 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 H3BSH0 61 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 IGHA1P01876 353 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 HTR1AP08908 422 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms