RNA–Protein interactions for RNA: ENST00000419445.5

PGGT1B-203, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGGT1B, Length 9,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-203ENST00000419445 SRPK3Q9UPE1 567 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PLCL2Q9UPR0 1127 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 NCOR2Q9Y618 2525 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ATRXP46100 2492 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 IGKV1-12A0A0C4DH73 117 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 C17orf105B2RV13 164 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 UBE2CO00762 179 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PHYHO14832 338 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 KLF8O95600 359 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 BPNT1O95861 308 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 IGKV1D-12P01611 117 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 AGTR1P30556 359 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 CENPAP49450 140 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 EIF3IQ13347 325 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TMEM200AQ86VY9 491 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 MSI2Q96DH6 328 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SPSB2Q99619 263 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 CMSS1Q9BQ75 279 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 WFDC1Q9HC57 220 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 DNAJB11Q9UBS4 358 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 RRP8O43159 456 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 APODP05090 189 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PGA4P0DJD7 388 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PGA3P0DJD8 388 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PGAM2P15259 253 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 MAOBP27338 520 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 RPL4P36578 427 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PTGFRP43088 359 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SULT1A2P50226 295 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 MAZP56270 477 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SMAD4Q13485 552 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ODF4Q2M2E3 257 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 RPL7L1Q6DKI1 246 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 Q7L0L9 218 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 UBAC2Q8NBM4 344 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ERGIC1Q969X5 290 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SMAD5Q99717 465 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 CMKLR1Q99788 373 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 DHCR7Q9UBM7 475 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ZFHX2Q9C0A1 2572 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TMED7-TICAM2A0A0A6YYA0 188 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ELOA3DA6NLF2 546 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 C1QTNF9BB2RNN3 333 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 LRP3O75074 770 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 HIST1H1DP16402 221 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ATF4P18848 351 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 APOBEC1P41238 236 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 CCR4P51679 360 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SUCLG1P53597 346 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 GPR85P60893 370 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ENDOGQ14249 297 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ELOA3BQ3SY89 546 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TMEM123Q8N131 208 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ELOA3Q8NG57 546 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR1M1Q8NGA1 313 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR5L2Q8NGL0 311 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR1N1Q8NGS0 311 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 MARS2Q96GW9 593 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PRODH2Q9UF12 536 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR52A1Q9UKL2 312 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 CENPEQ02224 2701 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 HRNRQ86YZ3 2850 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SQSTM1Q13501 440 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 UBE2V2Q15819 145 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 C10orf128Q5T292 105 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ADPRHL1Q8NDY3 354 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR10G6Q8NH81 332 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ELP5Q8TE02 316 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 WWTR1Q9GZV5 400 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 FGF23Q9GZV9 251 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 CHMP1AQ9HD42 196 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 DZANK1Q9NVP4 752 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PRR13Q9NZ81 148 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 RCL1Q9Y2P8 373 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 EMC9Q9Y3B6 208 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 DOCK10Q96BY6 2186 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 IGHV1OR21-1A0A087WYE8 117 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SS18L1O75177 396 aaPredicted RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 HHEXQ03014 270 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 RBMS3Q6XE24 437 aaKnown RBP3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 FJX1Q86VR8 437 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 ZNF227Q86WZ6 799 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR4K17Q8NGC6 315 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 OR13C9Q8NGT0 318 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 SFT2D1Q8WV19 159 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TMEM171Q8WVE6 324 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TCTN2Q96GX1 697 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 TGIF2Q9GZN2 237 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
PGGT1B-203ENST00000419445 MED12LQ86YW9 2145 aa3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 K7N7A8 449 aa3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 MTRF1O75570 445 aaKnown RBP3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 CDCP2Q5VXM1 449 aa3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 BEST3Q8N1M1 668 aa3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 PLPP5Q8NEB5 264 aa3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 PRDM13Q9H4Q3 707 aa3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 GPN1Q9HCN4 374 aaPredicted RBP3.17□□□□□ -1.9
PGGT1B-203ENST00000419445 RPH3AQ9Y2J0 694 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms