RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 PRPSAP1Q14558 356 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 POU2AF1Q16633 256 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 EXOC3L4Q17RC7 722 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 BSXQ3C1V8 233 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 LRRC10Q5BKY1 277 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 FAM27D1Q5T7N8 215 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 MFSD14CQ5VZR4 134 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 RESP18Q5W5W9 173 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 THOC7Q6I9Y2 204 aaKnown RBP1.96□□□□□ -2.1
PTPRC-207ENST00000418674 FRMPD2BQ6IN97 320 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 CLEC18BQ6UXF7 455 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 ACP7Q6ZNF0 438 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 COX15Q7KZN9 410 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 TMEM25Q86YD3 366 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 RAB43Q86YS6 212 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 KRTAP11-1Q8IUC1 163 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 C12orf56Q8IXR9 622 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 CA13Q8N1Q1 262 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 RNF10Q8N5U6 811 aaKnown RBP1.96□□□□□ -2.1
PTPRC-207ENST00000418674 ATP6V1C2Q8NEY4 427 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 OR10W1Q8NGF6 305 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 OR2G3Q8NGZ4 309 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 UBA3Q8TBC4 463 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 ZFP90Q8TF47 636 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 PHF10Q8WUB8 498 aaKnown RBP1.96□□□□□ -2.1
PTPRC-207ENST00000418674 LRRC29Q8WV35 223 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 TMEM234Q8WY98 164 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 IL22RA2Q969J5 263 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 SGTBQ96EQ0 304 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 SMIM10Q96HG1 83 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 UBE2E2Q96LR5 201 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 RBBP8Q99708 897 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 RASL11BQ9BPW5 248 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 GABARAPL3Q9BY60 117 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 ING2Q9H160 280 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 PORCNQ9H237 461 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 WDR54Q9H977 334 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 PDFQ9HBH1 243 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 FBXO8Q9NRD0 319 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 NLE1Q9NVX2 485 aaPredicted RBP1.96□□□□□ -2.1
PTPRC-207ENST00000418674 C1orf109Q9NX04 203 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 HMGXB4Q9UGU5 601 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 NAGKQ9UJ70 344 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 ACOT9Q9Y305 439 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 OR51B2Q9Y5P1 312 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 MRPS18BQ9Y676 258 aaKnown RBP1.96□□□□□ -2.1
PTPRC-207ENST00000418674 KCNE3Q9Y6H6 103 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 FHOD3Q2V2M9 1422 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 CEMIPQ8WUJ3 1361 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 MEGF6O75095 1541 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 C2orf16Q68DN1 1984 aa1.96□□□□□ -2.1
PTPRC-207ENST00000418674 IGLV1-36A0A0B4J1U3 117 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 CIB4A0PJX0 185 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 GOLGA8IPA6NC78 632 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 GOLGA8JA6NMD2 632 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 H3BNH8 94 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 PANO1I0J062 215 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 ZNF861PO60384 105 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 CDC40O60508 579 aaKnown RBP eCLIP1.95□□□□□ -2.1
PTPRC-207ENST00000418674 PSIP1O75475 530 aaKnown RBP1.95□□□□□ -2.1
PTPRC-207ENST00000418674 TNFSF13O75888 250 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 INSP01308 110 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 IGHV4-34P06331 123 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 GOLGA8HP0CJ92 632 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 THRAP10827 490 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 RAB3BP20337 219 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 CCNE1P24864 410 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 PFN2P35080 140 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 NUDT1P36639 197 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 GALR1P47211 349 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 FGF8P55075 233 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-207ENST00000418674 PRKCDQ05655 676 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 REG3AQ06141 175 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 C2orf54Q08AI8 447 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 MADCAM1Q13477 382 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 QPRTQ15274 297 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 GUSBP1Q15486 140 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 ZNHIT3Q15649 155 aaPredicted RBP1.95□□□□□ -2.1
PTPRC-207ENST00000418674 RBM48Q5RL73 367 aaKnown RBP1.95□□□□□ -2.1
PTPRC-207ENST00000418674 IDNKQ5T6J7 187 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 OR2T5Q6IEZ7 315 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 EPGNQ6UW88 154 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 TEX43Q6ZNM6 134 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 LINC00173Q6ZV60 143 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 DCXRQ7Z4W1 244 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 SLC30A8Q8IWU4 369 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 BBS7Q8IWZ6 715 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 DAW1Q8N136 415 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 ATPAF2Q8N5M1 289 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 NPWQ8N729 165 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 LRRC52Q8N7C0 313 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 LINC01555Q8NAE3 123 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 NPBQ8NG41 125 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 OR10G9Q8NGN4 311 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 OR10Z1Q8NGY1 313 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 OR10J6PQ8NGY7 276 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 OR2T29Q8NH02 315 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 OR5AK3PQ8NH89 298 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 SFXN5Q8TD22 340 aa1.95□□□□□ -2.1
PTPRC-207ENST00000418674 MCOLN3Q8TDD5 553 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms