RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 H3BQ15 152 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 PHOX2AO14813 284 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SCGNO76038 276 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 IGKV1D-16P01601 117 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CT62P0C5K7 136 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TRGC1P0CF51 173 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TAGLN2P37802 199 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 MGAT2Q10469 447 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 GGNBP1Q5YKI7 109 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 MFSD8Q8NHS3 518 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SMARCD2Q92925 531 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 POM121Q96HA1 1249 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 JSRP1Q96MG2 331 aaPredicted RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SCGB3A2Q96PL1 93 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 PRRX2Q99811 253 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 GINS3Q9BRX5 216 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 OR11A1Q9GZK7 315 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC25A31Q9H0C2 315 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CRLF2Q9HC73 371 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SPHK2Q9NRA0 654 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ANAPC10Q9UM13 185 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TGIF2-C20orf24A0A0A6YYL0 155 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 FIGNL2A6NMB9 653 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 EREGO14944 169 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CYB5BO43169 146 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 GUSBP08236 651 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CSF2RAP15509 400 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 DHPSP49366 369 aaPredicted RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 PPM1FP49593 454 aaPredicted RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 QRFPP83859 136 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CDK3Q00526 305 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 LY6G5CQ5SRR4 150 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF664Q8N3J9 261 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 C10orf53Q8N6V4 93 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 OR13C3Q8NGS6 347 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SNIP1Q8TAD8 396 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 NT5CQ8TCD5 201 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ABHD5Q8WTS1 349 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 ERGIC1Q969X5 290 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 CNTD2Q9H8S5 307 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 UNKLQ9H9P5 680 aaKnown RBP7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 SIRT7Q9NRC8 400 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 HHLA2Q9UM44 414 aa7.14□□□□□ -1.27
HMGXB4-202ENST00000418170 TLCD2A6NGC4 264 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 MARCH11A6NNE9 402 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 DVL1O14640 695 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 FGF17O60258 216 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 C1QL1O75973 258 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF141Q15928 474 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC22A25Q6T423 547 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 LPAR4Q99677 370 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 DDA1Q9BW61 102 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TCEAL2Q9H3H9 227 aaPredicted RBP7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 PLEKHA2Q9HB19 425 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 CAPN10Q9HC96 672 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 URGCP-MRPS24S4R325 110 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 B3GALT2O43825 422 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 CTSVO60911 334 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 MBP02144 154 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 PRH1P02810 166 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 QDPRP09417 244 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 ASAH2BP0C7U1 165 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 SMIM10L1P0DMW3 83 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 GZMBP10144 247 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 PPP1CCP36873 323 aaKnown RBP7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 GABRA4P48169 554 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 PSG6Q00889 435 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 RPL18Q07020 188 aaKnown RBP7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 IAH1Q2TAA2 248 aaPredicted RBP7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 OTPQ5XKR4 325 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC18B1Q6NT16 456 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 RTN4RL2Q86UN3 420 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 OR4N2Q8NGD1 307 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 OR2I1PQ8NGU4 316 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 ZCCHC10Q8TBK6 192 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 RNASEH2CQ8TDP1 164 aaKnown RBP7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 FRZBQ92765 325 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 CTHRC1Q96CG8 243 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 SMIM10Q96HG1 83 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TRPM6Q9BX84 2022 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 MMP25Q9NPA2 562 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TUBD1Q9UJT1 453 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 CFAP54Q96N23 3096 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 BORCS7-ASMTA0A0B4J1R7 106 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM269A0A1B0GVZ9 245 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 CYTIPO60759 359 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 IFI6P09912 130 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC35G6P0C7Q6 338 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 NR2C1P13056 603 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 G0S2P27469 103 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 P2RY1P47900 373 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 UBE2KP61086 200 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 RPS15AP62244 130 aaKnown RBP7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM52BQ4KMG9 183 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 LHFPL1Q86WI0 220 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM156Q8N614 296 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 KREMEN2Q8NCW0 462 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 OR14K1Q8NGZ2 314 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 C5orf34Q96MH7 638 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 RARRES2Q99969 163 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms