RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 PVALBP20472 110 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 ID4P47928 161 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SLC6A9P48067 706 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 DCDP81605 110 aaKnown RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 DMRTC1Q5HYR2 192 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 H3F3CQ6NXT2 135 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 DRAM2Q6UX65 266 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 LILRB1Q8NHL6 650 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 MARCH1Q8TCQ1 289 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 RNF138Q8WVD3 245 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SPACA5Q96QH8 159 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SERINC1Q9NRX5 453 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 SLC22A11Q9NSA0 550 aa8.68□□□□□ -1.02
CD44-206ENST00000415148 ZNF629Q9UEG4 869 aaPredicted RBP8.68□□□□□ -1.02
CD44-206ENST00000415148 RTTNQ86VV8 2226 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 IGHV1OR21-1A0A087WYE8 117 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 ZNF878C9JN71 531 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 ADAP1O75689 374 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 SFT2D2O95562 160 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 HIST1H1DP16402 221 aaKnown RBP8.67□□□□□ -1.02
CD44-206ENST00000415148 BIDP55957 195 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 DEFB133Q30KQ1 61 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 DHRS7BQ6IAN0 325 aaPredicted RBP8.67□□□□□ -1.02
CD44-206ENST00000415148 TMPRSS9Q7Z410 1059 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 ZNF101Q8IZC7 436 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 OR10S1Q8NGN2 331 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 OR2AJ1Q8NGZ0 328 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 NUBPLQ8TB37 319 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 ARL11Q969Q4 196 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 RAB3CQ96E17 227 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 MRGPRX4Q96LA9 322 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 C5orf34Q96MH7 638 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 NICN1Q9BSH3 213 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 PCED1AQ9H1Q7 454 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 MED29Q9NX70 200 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 OR5AC2Q9NZP5 309 aa8.67□□□□□ -1.02
CD44-206ENST00000415148 MRPS28Q9Y2Q9 187 aaKnown RBP8.67□□□□□ -1.02
CD44-206ENST00000415148 CARHSP1Q9Y2V2 147 aaKnown RBP8.67□□□□□ -1.02
CD44-206ENST00000415148 FOLR1P15328 257 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 FOSL2P15408 326 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 CCL1P22362 96 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 RFC3P40938 356 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 AKR1C3P42330 323 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 AIMP2Q13155 320 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 KCNMB1Q16558 191 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 MICBQ29980 383 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 PRSS54Q6PEW0 395 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 GLIPR1L1Q6UWM5 242 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 IL34Q6ZMJ4 242 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 COX15Q7KZN9 410 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 PEG10Q86TG7 708 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 OR56B1Q8NGI3 324 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 OR13C9Q8NGT0 318 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 FBXO17Q96EF6 278 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 SOX7Q9BT81 388 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 URM1Q9BTM9 101 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.66□□□□□ -1.02
CD44-206ENST00000415148 MMP26Q9NRE1 261 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 SDHAF3Q9NRP4 125 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 DNAJB11Q9UBS4 358 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 GHRLQ9UBU3 117 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 DUX1O43812 170 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 CDC14BO60729 498 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 FARS2O95363 451 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 MUC1P15941 1255 aaPredicted RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 FPR2P25090 351 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 FOXL2P58012 376 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 OR1D5P58170 312 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 RBM39Q14498 530 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 SGCAQ16586 387 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 RBMS3Q6XE24 437 aaKnown RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 Q6ZS52 159 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 RAB11FIP2Q7L804 512 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 OR5AS1Q8N127 324 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 FAM89BQ8N5H3 189 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 NFAM1Q8NET5 270 aaPredicted RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 CADM4Q8NFZ8 388 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 OR51F2Q8NH61 342 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 OR51E1Q8TCB6 317 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 SAT2Q96F10 170 aaPredicted RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 C1orf147Q96MC9 270 aaPredicted RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 CNTNAP3BQ96NU0 1288 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 AQP10Q96PS8 301 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 IFT22Q9H7X7 185 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 TREM1Q9NP99 234 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 ATXN7L1Q9ULK2 861 aaPredicted RBP8.66□□□□□ -1.02
CD44-206ENST00000415148 FLVCR1Q9Y5Y0 555 aa8.66□□□□□ -1.02
CD44-206ENST00000415148 IGLV3-32A0A0A0MS00 114 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 A0A0A6YYD4 124 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 TAAR5O14804 337 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 EIF3GO75821 320 aaKnown RBP eCLIP8.65□□□□□ -1.02
CD44-206ENST00000415148 PET100P0DJ07 73 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 PGA4P0DJD7 388 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 PGA3P0DJD8 388 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 GIMD1P0DJR0 217 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 CBR1P16152 277 aa8.65□□□□□ -1.02
CD44-206ENST00000415148 LTBRP36941 435 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms