RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OXA1LQ15070 435 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 RTL8BQ17RB0 113 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 TSEN54Q7Z6J9 526 aaKnown RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 FBXL14Q8N1E6 418 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 OR51S1Q8NGJ8 323 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 CIB3Q96Q77 187 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 TUSC2O75896 110 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 WNT1P04628 370 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 TMIGD3P0DMS9 266 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 AADACP22760 399 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 SNRPD2P62316 118 aaKnown RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 IGLV3-21P80748 117 aaPredicted RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 SORDQ00796 357 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 SLC25A26Q70HW3 274 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 OR5AS1Q8N127 324 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 SLC25A45Q8N413 288 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 ST7LQ8TDW4 575 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 ESRP2Q9H6T0 727 aaKnown RBP10.69□□□□□ -0.7
PTPRF-205ENST00000414879 FLRT3Q9NZU0 649 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 ST3GAL6Q9Y274 331 aa10.69□□□□□ -0.7
PTPRF-205ENST00000414879 IGKV1-8A0A0C4DH67 115 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF705EA8MWA4 302 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 IGHA1P01876 353 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 HAAOP46952 286 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 SLC36A1Q7Z2H8 476 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 CATSPERDQ86XM0 798 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 CDH26Q8IXH8 852 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 MYOZ1Q9NP98 299 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 M0QYG6 137 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 IFNA10P01566 189 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 CDKN2AP42771 156 aaKnown RBP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 CD226Q15762 336 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 C9orf40Q8IXQ3 194 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 SLC35G3Q8N808 338 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 SLC30A7Q8NEW0 376 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 OGG1O15527 345 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 CTF1Q16619 201 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 SFRP5Q5T4F7 317 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 COMMD7Q86VX2 200 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 UHRF2Q96PU4 802 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 RNF150Q9ULK6 438 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 TMEM30CPA0ZSE6 113 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 OR2F2O95006 317 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 BGLAPP02818 100 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 DCTDP32321 178 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 RFC3P40938 356 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 OR2F1Q13607 317 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 KRTCAP3Q53RY4 240 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 WDR38Q5JTN6 314 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 CREB3L2Q70SY1 520 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 H2BFWTQ7Z2G1 175 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 OR51A4Q8NGJ6 313 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 AKR7LQ8NHP1 331 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 ASB5Q8WWX0 329 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 FGF11Q92914 225 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 RBMXL1Q96E39 390 aaKnown RBP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 ZC3HAV1LQ96H79 300 aaKnown RBP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 ANGPTL4Q9BY76 406 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.68□□□□□ -0.7
PTPRF-205ENST00000414879 ASF1BQ9NVP2 202 aa10.68□□□□□ -0.7
PTPRF-205ENST00000414879 SP1P08047 785 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ATF4P18848 351 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-205ENST00000414879 CHATP28329 748 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 OPCMLQ14982 345 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 LFNGQ8NES3 379 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 RNF141Q8WVD5 230 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 SLC39A7Q92504 469 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 PLEKHA2Q9HB19 425 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 AKIP1Q9NQ31 210 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF275Q9NSD4 429 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-205ENST00000414879 RNF24Q9Y225 148 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 MGAMO43451 1857 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 MEIKINA0A087WXM9 373 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ADH4P08319 380 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 MPGP29372 298 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 EDDM3AQ14507 147 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 CEBPEQ15744 281 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 CCDC190Q86UF4 302 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 OR2M7Q8NG81 312 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 OR1S2Q8NGQ3 325 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 SLC7A6Q92536 515 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 GMPPAQ96IJ6 420 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF285Q96NJ3 590 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 TAAR6Q96RI8 345 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 IL5P05113 134 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 HOXB1P14653 301 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF32P17041 273 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 PCSK6P29122 969 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 S100A11P31949 105 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 LTBRP36941 435 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 GPR12P47775 334 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 NPY4RP50391 375 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 RAB5BP61020 215 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 SUCNR1Q9BXA5 334 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 PATE3B3GLJ2 98 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 APOC3P02656 99 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 OR5H8P0DN80 308 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 IGFBP7Q16270 282 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms