RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GLCCI1Q86VQ1 547 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 GALNT4Q8N4A0 578 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 YIPF7Q8N8F6 280 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MSI2Q96DH6 328 aaKnown RBP12.43□□□□□ -0.42
CHD1-202ENST00000414220 RNFT2Q96EX2 444 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MBOAT4Q96T53 435 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 TBX5Q99593 518 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MICU1Q9BPX6 476 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 DCLRE1BQ9H816 532 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 FAM118AQ9NWS6 357 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 TMEM160Q9NX00 188 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 UBAP1Q9NZ09 502 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 CDC42EP3Q9UKI2 254 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 COPS3Q9UNS2 423 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 MPC1Q9Y5U8 109 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 SNX5Q9Y5X3 404 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 R4GMQ9 66 aa12.43□□□□□ -0.42
CHD1-202ENST00000414220 METTL15A6NJ78 407 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 TMEM178BH3BS89 294 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 SLC16A6O15403 523 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 ENTPD6O75354 484 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 CPT2P23786 658 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 MDH2P40926 338 aaKnown RBP12.42□□□□□ -0.42
CHD1-202ENST00000414220 BTG1P62324 171 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 KCNJ8Q15842 424 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 LRRC36Q1X8D7 754 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 CHRFAM7AQ494W8 412 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 TMEM155Q4W5P6 130 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 BCL2L15Q5TBC7 163 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 KCTD20Q7Z5Y7 419 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 OR8B12Q8NGG6 310 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 OR51F2Q8NH61 342 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 ADI1Q9BV57 179 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 PAPOLGQ9BWT3 736 aaKnown RBP12.42□□□□□ -0.42
CHD1-202ENST00000414220 BEX2Q9BXY8 128 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 TTTY10Q9BZA0 68 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 SHARPINQ9H0F6 387 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 ZNF665Q9H7R5 613 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 FAM206AQ9NX38 181 aa12.42□□□□□ -0.42
CHD1-202ENST00000414220 HIVEP2P31629 2446 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 PPIAL4EA0A075B759 164 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 A0A1W2PQL4 384 aaPredicted RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 DAPL1A0PJW8 107 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 A6NLC8 198 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 ANKRD65E5RJM6 399 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 PPIAL4DF5H284 164 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 CRLF1O75462 422 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 PPIAL4FP0DN26 164 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 DVL1P1P54792 670 aaPredicted RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 RIPPLY1Q0D2K3 151 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 MAB21L1Q13394 359 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 OR8B8Q15620 311 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 LRRC28Q86X40 367 aaPredicted RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 TEX29Q8N6K0 151 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 SETD9Q8NE22 299 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 SEMA6DQ8NFY4 1073 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 ZNF420Q8TAQ5 688 aaPredicted RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 Q8TCH9 128 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 UBE2FQ969M7 185 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 SIGLEC11Q96RL6 698 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 RTL8AQ9BWD3 113 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 TRIM36Q9NQ86 728 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 ZNF319Q9P2F9 582 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 NUFIP1Q9UHK0 495 aaKnown RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 OR52A1Q9UKL2 312 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 RPL36Q9Y3U8 105 aaKnown RBP12.41□□□□□ -0.42
CHD1-202ENST00000414220 PPIAL4AQ9Y536 164 aa12.41□□□□□ -0.42
CHD1-202ENST00000414220 TRAV20A0A0B4J274 112 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 ZNF816-ZNF321PA0A0X1KG74 233 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 C5orf63A6NC05 138 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 ERICH4A6NGS2 130 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 RPP14O95059 124 aaKnown RBP12.4□□□□□ -0.42
CHD1-202ENST00000414220 CST4P01036 141 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 IGHV2-70P01814 119 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 GRPP07492 148 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 MSMBP08118 114 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 IL2RGP31785 369 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 LMO4P61968 165 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 KLHL22Q53GT1 634 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 SPRNQ5BIV9 151 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 ZBTB37Q5TC79 503 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 LPCAT4Q643R3 524 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 ENTHD1Q8IYW4 607 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 DHRSXQ8N5I4 330 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 ACBD7Q8N6N7 88 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 CCDC54Q8NEL0 328 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 RHOXF1Q8NHV9 184 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 CYGBQ8WWM9 190 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 PIGCQ92535 297 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 GPR84Q9NQS5 396 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 UFSP2Q9NUQ7 469 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 MRM2Q9UI43 246 aaKnown RBP12.4□□□□□ -0.42
CHD1-202ENST00000414220 ENPP5Q9UJA9 477 aa12.4□□□□□ -0.42
CHD1-202ENST00000414220 VPS13CQ709C8 3753 aa12.4□□□□□ -0.43
CHD1-202ENST00000414220 CSPG4Q6UVK1 2322 aa12.39□□□□□ -0.43
CHD1-202ENST00000414220 CR1P17927 2039 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms