RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 LINC00596Q86U02 117 aa6.71□□□□□ -1.34
PTPN3-203ENST00000412145 NLGN4XQ8N0W4 816 aa6.71□□□□□ -1.34
PTPN3-203ENST00000412145 OR51H1Q8NH63 302 aa6.71□□□□□ -1.34
PTPN3-203ENST00000412145 NRG4Q8WWG1 115 aa6.71□□□□□ -1.34
PTPN3-203ENST00000412145 SLC52A3Q9NQ40 469 aa6.71□□□□□ -1.34
PTPN3-203ENST00000412145 WSB1Q9Y6I7 421 aa6.71□□□□□ -1.34
PTPN3-203ENST00000412145 LDB3O75112 727 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZBTB25P24278 435 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 SHC1P29353 583 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 EMP3P54852 163 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 SQSTM1Q13501 440 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 FAM26DQ5JW98 314 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 C11orf87Q6NUJ2 197 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 RNASEKQ6P5S7 137 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 Q6ZN92 141 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF687Q8N1G0 1237 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TMEM102Q8N9M5 508 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 FGF14Q92915 247 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 SLAMF6Q96DU3 332 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 GPR37O15354 613 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 IL24Q13007 206 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 RNPS1Q15287 305 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 AANATQ16613 207 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 NKAIN1Q4KMZ8 207 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 GLDNQ6ZMI3 551 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 C11orf42Q8N5U0 333 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 FAM210BQ96KR6 192 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 PMCHL2Q9BQD1 86 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CHST8Q9H2A9 424 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 KCNAB3O43448 404 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TIMP1P01033 207 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CST5P28325 142 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 GZMKP49863 264 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 BTG2P78543 158 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 LPAL2Q16609 132 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 KHDC3LQ587J8 217 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 KIAA1958Q8N8K9 716 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ADGRL4Q9HBW9 690 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CA3P07451 260 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CEBPBP17676 345 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CD22P20273 847 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CD68P34810 354 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 MEOX2P50222 304 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF273Q14593 569 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF528Q3MIS6 628 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CYB5R2Q6BCY4 276 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 MYPOPQ86VE0 399 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 OSR2Q8N2R0 312 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 OR1L6Q8NGR2 347 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 OR5R1Q8NH85 324 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CSNK1G1Q9HCP0 422 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 FGF20Q9NP95 211 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 SNED1Q8TER0 1413 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF785A8K8V0 405 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 CBR1P16152 277 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 RPS4Y1P22090 263 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 EXOSC2Q13868 293 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 SYPL1Q16563 259 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 APCDD1Q8J025 514 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TMEM116Q8NCL8 245 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF384Q8TF68 577 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 NXF2Q9GZY0 626 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TMEM9BQ9NQ34 198 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 FAM206AQ9NX38 181 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TECRQ9NZ01 308 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 FBXL17Q9UF56 701 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TCFL5Q9UL49 500 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 MEIKINA0A087WXM9 373 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 OR52A4PA6NMU1 304 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ZNF865P0CJ78 1059 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 T-ENOLP0DO92 83 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TNFRSF1BP20333 461 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 PCMT1P22061 227 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 DHRS7BQ6IAN0 325 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 LCN15Q6UWW0 184 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 RPS19BP1Q86WX3 136 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 LINC00597Q9H2U6 94 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 C1RLQ9NZP8 487 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 WRAP73Q9P2S5 460 aaPredicted RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 GNB1P62873 340 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 PAPPA-AS1Q5QFB9 102 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 PRSS42Q7Z5A4 293 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 TEAD3Q99594 435 aa6.7□□□□□ -1.34
PTPN3-203ENST00000412145 EXOGQ9Y2C4 368 aaKnown RBP6.7□□□□□ -1.34
PTPN3-203ENST00000412145 ARID1BQ8NFD5 2236 aaPredicted RBP6.69□□□□□ -1.34
PTPN3-203ENST00000412145 HRO43593 1189 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 TSPAN12O95859 305 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 FABP2P12104 132 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 FUT3P21217 361 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 CD200P41217 278 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
PTPN3-203ENST00000412145 OR1C1Q15619 314 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 PLAC9Q5JTB6 97 aa6.69□□□□□ -1.34
PTPN3-203ENST00000412145 Q7L0L9 218 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms