RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 VN1R3Q9BXE9 311 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 FZD8Q9H461 694 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 AGPAT4Q9NRZ5 378 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF346Q9UL40 294 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 KDM6BO15054 1643 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 hCG_1818297A0A087WSY0 165 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 A8MT66 165 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SOCS6O14544 535 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TOMM40O96008 361 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF888P0CJ79 500 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TMIGD3P0DMS9 266 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 POLR2IP36954 125 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 NPY4RP50391 375 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF765Q7L2R6 523 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 PRSS48Q7RTY5 328 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM102Q8N9M5 508 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GLIS3Q8NEA6 775 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CERKQ8TCT0 537 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 PURBQ96QR8 312 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GPR21Q99679 349 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 NRIP2Q9BQI9 281 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 UBE2ZQ9H832 354 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 UQCC1Q9NVA1 299 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CXorf49A8MYA2 514 aaPredicted RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 ITGB1BP1O14713 200 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CA12O43570 354 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 NKX2-2O95096 273 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 IDUAP35475 653 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CCR5P51681 352 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TDGF1P3P51864 188 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 PNLIPRP2P54317 469 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 EMC4Q5J8M3 183 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 PLXDC1Q8IUK5 500 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 SH3RF2Q8TEC5 729 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 RAX2Q96IS3 184 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 TSGA13Q96PP4 275 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 DERL1Q9BUN8 251 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
PTPN13-202ENST00000411767 METTL1Q9UBP6 276 aaKnown RBP4.18□□□□□ -1.74
PTPN13-202ENST00000411767 GFRA2O00451 464 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 WNT9AO14904 365 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ABLIM3O94929 683 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 NTN1O95631 604 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ATP4BP51164 291 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 CCR6P51684 374 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TAS2R38P59533 333 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 PAX2Q02962 417 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 PRSS53Q2L4Q9 553 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF818PQ6ZRF7 136 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 DDB2Q92466 427 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 IP6K1Q92551 441 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 HSPB9Q9BQS6 159 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 LRRC61Q9BV99 259 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 RSPO3Q9BXY4 272 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TEX101Q9BY14 249 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 PLB1Q6P1J6 1458 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 NEURL1BA8MQ27 555 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TRACP01848 142 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 LINC00869P0C866 280 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 LCN8Q6JVE9 175 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ZDHHC24Q6UX98 284 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 BTLAQ7Z6A9 289 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 NAXDQ8IW45 347 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 DOK4Q8TEW6 326 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TTTY10Q9BZA0 68 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 LHX5Q9H2C1 402 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 GHITMQ9H3K2 345 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 AGO3Q9H9G7 860 aaKnown RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 G6PC2Q9NQR9 355 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TAS2R5Q9NYW4 299 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 IL36AQ9UHA7 158 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 SPCS1Q9Y6A9 102 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 PREX2Q70Z35 1606 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1W2PP11 408 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 POM121CA8CG34 1229 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 LCN15Q6UWW0 184 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 NHLRC1Q6VVB1 395 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 OTOP2Q7RTS6 562 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 CPEB2Q7Z5Q1 589 aaKnown RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 OR10AC1Q8NH08 325 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 MRPL30Q8TCC3 161 aaKnown RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 RPS4Y2Q8TD47 263 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 C2orf15Q8WU43 125 aaKnown RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 C11orf40Q8WZ69 217 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 LPAR4Q99677 370 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM47Q9BQJ4 181 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 INPP5KQ9BT40 448 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 RNF167Q9H6Y7 350 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 RPRMQ9NS64 109 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 DTX4Q9Y2E6 619 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 FAM74A7A6NL05 159 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TMPRSS11DO60235 418 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF253O75346 499 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 EVI2AP22794 236 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 TSPOP30536 169 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 WNT3AP56704 352 aa4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ASTLQ6HA08 431 aaPredicted RBP4.17□□□□□ -1.74
PTPN13-202ENST00000411767 ACSM5Q6NUN0 579 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms