RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 ISPDA4D126 451 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 ANKRD30BLA7E2S9 258 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 FAM157AC9JC47 383 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 TMEM178BH3BS89 294 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 IFNL4K9M1U5 179 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 DLGAP1O14490 977 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 SRSF10O75494 262 aaKnown RBP13.75□□□□□ -0.21
NOD1-202ENST00000411552 IGHV2-70P01814 119 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 OR2T7P0C7T2 308 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 GABRB1P18505 474 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 PEX2P28328 305 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 ATP6V1E1P36543 226 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 PMELP40967 661 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 MTNR1AP48039 350 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 MEDAGQ5VYS4 303 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 ZNF771Q7L3S4 317 aaPredicted RBP13.75□□□□□ -0.21
NOD1-202ENST00000411552 KLBQ86Z14 1044 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 ENTHD1Q8IYW4 607 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 OR2T27Q8NH04 317 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 POM121Q96HA1 1249 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 GAL3ST1Q99999 423 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 PBOV1Q9GZY1 135 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 ZNF391Q9UJN7 358 aa13.75□□□□□ -0.21
NOD1-202ENST00000411552 A0A0U1RQV5 110 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 SLC16A6O15403 523 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 LMX1BO60663 402 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 CRLF1O75462 422 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 CYB5R3P00387 301 aaPredicted RBP13.74□□□□□ -0.21
NOD1-202ENST00000411552 PNPP00491 289 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 IGHV2-5P01817 119 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 ACKR3P25106 362 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 BTG1P62324 171 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 ZMYND11Q15326 602 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 MPPED2Q15777 294 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 PRAMEF6Q5VXH4 476 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 PLEKHG7Q6ZR37 379 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 CSNK2A3Q8NEV1 391 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 PPP1R14AQ96A00 147 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 RNFT2Q96EX2 444 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 RDH12Q96NR8 316 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 PPP1R3EQ9H7J1 279 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 UFSP2Q9NUQ7 469 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 NUFIP1Q9UHK0 495 aaKnown RBP13.74□□□□□ -0.21
NOD1-202ENST00000411552 KCNS2Q9ULS6 477 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 RHBDD3Q9Y3P4 386 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 R4GMQ9 66 aa13.74□□□□□ -0.21
NOD1-202ENST00000411552 SVEP1Q4LDE5 3571 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.73□□□□□ -0.21
NOD1-202ENST00000411552 ERICH4A6NGS2 130 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 B4DSR2 109 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 LOC110117498-PIK3R3F6TDL0 507 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 MPZL2O60487 215 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 FAM20BO75063 409 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 PTBP3O95758 552 aaKnown RBP13.73□□□□□ -0.21
NOD1-202ENST00000411552 KRT8P05787 483 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 ZNF181Q2M3W8 571 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 ZNF684Q5T5D7 378 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 LRRC28Q86X40 367 aaPredicted RBP13.73□□□□□ -0.21
NOD1-202ENST00000411552 YIPF7Q8N8F6 280 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 SPERTQ8NA61 448 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 RHOXF1Q8NHV9 184 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 OR51E1Q8TCB6 317 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 Q8TCH9 128 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 ERGIC1Q969X5 290 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 RAB39BQ96DA2 213 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 PAPOLGQ9BWT3 736 aaKnown RBP13.73□□□□□ -0.21
NOD1-202ENST00000411552 LPAR2Q9HBW0 351 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 G6PC2Q9NQR9 355 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 GPR84Q9NQS5 396 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 TMEM160Q9NX00 188 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 UBAP1Q9NZ09 502 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 GTF2A1LQ9UNN4 478 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 WNK2Q9Y3S1 2297 aa13.73□□□□□ -0.21
NOD1-202ENST00000411552 LRRC30A6NM36 301 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 SNTNA6NMZ2 147 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 J3QRE1 110 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 RPP14O95059 124 aaKnown RBP13.72□□□□□ -0.21
NOD1-202ENST00000411552 ZNF205O95201 554 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 IGLV3-1P01715 115 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 TTRP02766 147 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 MSMBP08118 114 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 GNALP38405 381 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 MDH2P40926 338 aaKnown RBP13.72□□□□□ -0.21
NOD1-202ENST00000411552 ELF3P78545 371 aaPredicted RBP13.72□□□□□ -0.21
NOD1-202ENST00000411552 ZNF85Q03923 595 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 BCL2L15Q5TBC7 163 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 COMMD2Q86X83 199 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 FTMTQ8N4E7 242 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 PACRGLQ8N7B6 248 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 PLPP7Q8NBV4 271 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 ZNF555Q8NEP9 628 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 OR11L1Q8NGX0 322 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 OR8S1Q8NH09 359 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 MOB1AQ9H8S9 216 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 FN3KRPQ9HA64 309 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 C8orf4Q9NR00 106 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 C14orf119Q9NWQ9 140 aa13.72□□□□□ -0.21
NOD1-202ENST00000411552 SNX5Q9Y5X3 404 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms