RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-220ENST00000411464 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 LY6G5BQ8NDX9 201 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 PROKR2Q8NFJ6 384 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 COPS4Q9BT78 406 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 SEMA6AQ9H2E6 1030 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 DCAF13Q9NV06 445 aaKnown RBP13.74□□□□□ -0.21
MRPL55-220ENST00000411464 ZNRD1Q9P1U0 126 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 ZNF281Q9Y2X9 895 aa13.74□□□□□ -0.21
MRPL55-220ENST00000411464 NPFFO15130 113 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 GPR37O15354 613 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 NDUFB3O43676 98 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 SLC2A1P11166 492 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 PYCR1P32322 319 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 PRKXP51817 358 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 SPIBQ01892 262 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 PCK2Q16822 640 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 WDR38Q5JTN6 314 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 DPY19L4Q7Z388 723 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 DCXRQ7Z4W1 244 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 FGFRL1Q8N441 504 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 OR2T4Q8NH00 348 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 OR5R1Q8NH85 324 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 LRRC29Q8WV35 223 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 SIRT7Q9NRC8 400 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 CENPMQ9NSP4 180 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 FAM53CQ9NYF3 392 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 ADA2Q9NZK5 511 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 DNAJB11Q9UBS4 358 aa13.73□□□□□ -0.21
MRPL55-220ENST00000411464 PRKDCP78527 4128 aaKnown RBP13.73□□□□□ -0.21
MRPL55-220ENST00000411464 A0A1B0GW55 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 A0A1W2PRD5 423 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 A0A1W2PRF3 423 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 A0A1W2PRM7 423 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 TVP23AA6NH52 213 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 XRCC2O43543 280 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L2P0CJ85 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L3P0CJ86 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L4P0CJ87 422 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L5P0CJ88 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L6P0CJ89 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L7P0CJ90 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 ANOS1P23352 680 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 NAA10P41227 235 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-220ENST00000411464 NUDT2P50583 147 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 IKZF1Q13422 519 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 LRRC10Q5BKY1 277 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 SLC35E4Q6ICL7 350 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4L9Q6RFH8 374 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-220ENST00000411464 HACD2Q6Y1H2 254 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 Q6ZTK2 550 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 FAM216BQ8N7L0 139 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 FAM86B1Q8N7N1 296 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 OR1M1Q8NGA1 313 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 KCNJ15Q99712 375 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 DUX4Q9UBX2 424 aa13.72□□□□□ -0.21
MRPL55-220ENST00000411464 CMYA5Q8N3K9 4069 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 MEIOCA2RUB1 952 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 RNASEK-C17orf49H0YIS7 233 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 TBX1O43435 398 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 CCDC22O60826 627 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 TIPRLO75663 272 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 SPARCP09486 303 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 GABRA5P31644 462 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 ELF3P78545 371 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-220ENST00000411464 PRB3Q04118 309 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-220ENST00000411464 ZDHHC21Q8IVQ6 265 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 C11orf53Q8IXP5 236 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 CYB561A3Q8NBI2 242 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 SPSB4Q96A44 273 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 C12orf43Q96C57 262 aaKnown RBP13.71□□□□□ -0.21
MRPL55-220ENST00000411464 PYURFQ96I23 114 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 PPA2Q9H2U2 334 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 FBLN5Q9UBX5 448 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 PRPF19Q9UMS4 504 aaKnown RBP13.71□□□□□ -0.21
MRPL55-220ENST00000411464 V9GYQ6 96 aa13.71□□□□□ -0.21
MRPL55-220ENST00000411464 G3V4G9 280 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 ACOT8O14734 319 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 SLC15A1P46059 708 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 GSSP48637 474 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 TGM4P49221 684 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 GYS2P54840 703 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 PSME3P61289 254 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 TSPAN31Q12999 210 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 HERPUD1Q15011 391 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 TIGD6Q17RP2 521 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 WDR82Q6UXN9 313 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 SLC16A9Q7RTY1 509 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 Q8N7P7 452 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 OR5T2Q8NGG2 359 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 OR52L1Q8NGH7 329 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 OR51L1Q8NGJ5 315 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 H1FXQ92522 213 aaKnown RBP13.7□□□□□ -0.22
MRPL55-220ENST00000411464 MCUR1Q96AQ8 359 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 SLAMF6Q96DU3 332 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 DCTN5Q9BTE1 182 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 ABCD2Q9UBJ2 740 aa13.7□□□□□ -0.22
MRPL55-220ENST00000411464 ZNF878C9JN71 531 aa13.69□□□□□ -0.22
MRPL55-220ENST00000411464 ZNF593O00488 134 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms