RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 RAB3CQ96E17 227 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 C16orf45Q96MC5 204 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF681Q96N22 645 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 NAP1L4Q99733 375 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 NAPGQ99747 312 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 AGPAT1Q99943 283 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ECSITQ9BQ95 431 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ACAT2Q9BWD1 397 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 EIF2AQ9BY44 585 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 EDEM3Q9BZQ6 932 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TSGA10Q9BZW7 698 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 DENND2DQ9H6A0 471 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CTPS2Q9NRF8 586 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM49BQ9NUQ9 324 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TBC1D13Q9NVG8 400 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TXNL4BQ9NX01 149 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 RHBDL2Q9NX52 303 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CNIH4Q9P003 139 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TXNDC16Q9P2K2 825 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 TUBGCP4Q9UGJ1 667 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 BAG5Q9UL15 447 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 ING4Q9UNL4 249 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 GTF2A1LQ9UNN4 478 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 CAB39Q9Y376 341 aaPredicted RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 HEY1Q9Y5J3 304 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 SCINQ9Y6U3 715 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 KDM5AP29375 1690 aaKnown RBP-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 PRDM2Q13029 1718 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 MROH5Q6ZUA9 1318 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 MYH10P35580 1976 aa-2.23□□□□□ -2.77
RNU4-88P-201ENST00000411220 NCOA3Q9Y6Q9 1424 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 GOLGA6L10A0A0M3HER8 536 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PGPA6NDG6 321 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR6C68A6NDL8 312 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 GLOD5A6NK44 160 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM159BA6NKW6 160 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 E9PLD3 99 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 H3BMM0 161 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 K7ENP7 123 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 KCNK1O00180 336 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 NDUFS8O00217 210 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PSMD12O00232 456 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 P4HA2O15460 535 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CNIH1O95406 144 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 HAND1O96004 215 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR5AC1P0C628 307 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBBP0CG47 229 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 IGHV3-30-3P0DP02 117 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 HTR2AP28223 471 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 GTF2H1P32780 548 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 GCKP35557 465 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FRKP42685 505 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CDKN2CP42773 168 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 GPR6P46095 362 aaPredicted RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CCT3P49368 545 aaKnown RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR1D5P58170 312 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR2B6P58173 313 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 NPC2P61916 151 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 BASP1P80723 227 aaKnown RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 MRPS11P82912 194 aaKnown RBP-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBXN1Q04323 297 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CYP24A1Q07973 514 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 ABRQ12979 859 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PON3Q15166 354 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 KCNJ8Q15842 424 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 GABRA6Q16445 453 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SGCAQ16586 387 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 MEP1BQ16820 701 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 MICBQ29980 383 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 ODF4Q2M2E3 257 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PIGYQ3MUY2 71 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PHLDA2Q53GA4 152 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 MDH1BQ5I0G3 518 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM74A1Q5RGS3 127 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 TTC22Q5TAA0 569 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM74A4Q5TZK3 123 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR10K2Q6IF99 312 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 NIPAL1Q6NVV3 410 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FAM71F2Q6NXP2 309 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 NCEH1Q6PIU2 408 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 DHRS11Q6UWP2 260 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CES3Q6UWW8 571 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 CLEC20AQ6ZU45 233 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 C16orf86Q6ZW13 317 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR2W3Q7Z3T1 314 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PRUNE1Q86TP1 453 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SLC22A16Q86VW1 577 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SDR16C5Q8N3Y7 309 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 EID2Q8N6I1 236 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 PLD5Q8N7P1 536 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF738Q8NE65 137 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR4E2Q8NGC2 313 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 OR5J2Q8NH18 312 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 RFESDQ8TAC1 157 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 UBE2WQ96B02 151 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 FBXL8Q96CD0 374 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 MALSU1Q96EH3 234 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 LURAP1Q96LR2 239 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 ZNF714Q96N38 554 aa-2.24□□□□□ -2.77
RNU4-88P-201ENST00000411220 SPRR4Q96PI1 79 aa-2.24□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms