RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SCP2D1Q9UJQ7 156 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 MGAT4AQ9UM21 535 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 ZNF780AO75290 641 aaPredicted RBP17.62■□□□□ 0.41
USP39-204ENST00000409766 B4GALT1P15291 398 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 THBS4P35443 961 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 MEIOBQ8N635 442 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 CHST4Q8NCG5 386 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 TMEM104Q8NE00 496 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 TINAGL1Q9GZM7 467 aaPredicted RBP17.62■□□□□ 0.41
USP39-204ENST00000409766 LPAR5Q9H1C0 372 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 ZNF224Q9NZL3 707 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 ZNF736B4DX44 427 aaPredicted RBP17.62■□□□□ 0.41
USP39-204ENST00000409766 PRF1P14222 555 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 CLDN18P56856 261 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 CEACAM16Q2WEN9 425 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 SNAI3Q3KNW1 292 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 CRIP3Q6Q6R5 217 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 NLRC3Q7RTR2 1065 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 FJX1Q86VR8 437 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 IL22RA1Q8N6P7 574 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 OR52H1Q8NGJ2 320 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 OR10R2Q8NGX6 335 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 ZNF431Q8TF32 576 aaPredicted RBP17.62■□□□□ 0.41
USP39-204ENST00000409766 TMEM45BQ96B21 275 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 FER1L6-AS2Q96M78 137 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 FOXB1Q99853 325 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 GPR35Q9HC97 309 aa17.62■□□□□ 0.41
USP39-204ENST00000409766 IGKV3D-15A0A087WSY6 115 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 M0QYG6 137 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 ALX3O95076 343 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 RLN1P04808 185 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 ITGB2P05107 769 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 ZNF735P0CB33 412 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 MAGEA5P43359 124 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 SCRN3Q0VDG4 424 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 ZNF774Q6NX45 483 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 DRAM2Q6UX65 266 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 GLRX5Q86SX6 157 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 PIP4P1Q86T03 277 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 ZNF584Q8IVC4 421 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 CCDC54Q8NEL0 328 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 OR52B4Q8NGK2 314 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 KCNG3Q8TAE7 436 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 PP6455Q8WZ26 134 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 NICN1Q9BSH3 213 aa17.61■□□□□ 0.41
USP39-204ENST00000409766 A0A0A6YYD4 124 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 FAM166BA8MTA8 275 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 CDC14BO60729 498 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 CHRM2P08172 466 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 FAHP16930 419 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
USP39-204ENST00000409766 KISS1Q15726 138 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 UBE2V2Q15819 145 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 RSPO4Q2I0M5 234 aaPredicted RBP17.6■□□□□ 0.41
USP39-204ENST00000409766 MYO7BQ6PIF6 2116 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.6■□□□□ 0.41
USP39-204ENST00000409766 TRAPPC6BQ86SZ2 158 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 OR1F12Q8NHA8 337 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 SGK3Q96BR1 496 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 C10orf35Q96D05 121 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 GPER1Q99527 375 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 SELENOIQ9C0D9 397 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 CHST5Q9GZS9 411 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 OR10A2Q9H208 303 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 CELSR3Q9NYQ7 3312 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 OR6C6A6NF89 314 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 G3V3Q6 166 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 MTRF1O75570 445 aaKnown RBP17.6■□□□□ 0.41
USP39-204ENST00000409766 AMY2AP04746 511 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 UBBP0CG47 229 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 GNB3P16520 340 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 ZNF708P17019 499 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 ZNF32P17041 273 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 HGFACQ04756 655 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 SRYQ05066 204 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 KRTAP27-1Q3LI81 207 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 DMRTC1Q5HYR2 192 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 SFRP5Q5T4F7 317 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 CHMP1BQ7LBR1 199 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 TMEM251Q8N6I4 163 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 OR4S1Q8NGB4 309 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 CA10Q9NS85 328 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 MGAT4CQ9UBM8 478 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 PIGLQ9Y2B2 252 aa17.6■□□□□ 0.41
USP39-204ENST00000409766 A6NL46 340 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 MPIG6BO95866 241 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 PATE4P0C8F1 98 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 DNASE1P24855 282 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 IDO2Q6ZQW0 420 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 OR2T35Q8NGX2 323 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 NUDCD2Q8WVJ2 157 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 SLC25A21Q9BQT8 299 aaPredicted RBP17.59■□□□□ 0.41
USP39-204ENST00000409766 ALX4Q9H161 411 aaPredicted RBP17.59■□□□□ 0.41
USP39-204ENST00000409766 SLC6A15Q9H2J7 730 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 EXO5Q9H790 373 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 SP1P08047 785 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 ALDH3B1P43353 468 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 PSG4Q00888 419 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 RTN4RL2Q86UN3 420 aa17.59■□□□□ 0.41
USP39-204ENST00000409766 MDS2Q8NDY4 140 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms