RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SMCO1Q147U7 214 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 FBXW9Q5XUX1 488 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 TMEM200AQ86VY9 491 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 OR8B12Q8NGG6 310 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 LINC01560Q8TB33 94 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 C4orf45Q96LM5 186 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 KCNJ15Q99712 375 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 ZNF703Q9H7S9 590 aaPredicted RBP10.04□□□□□ -0.8
SNX13-202ENST00000409604 FGF20Q9NP95 211 aaPredicted RBP10.04□□□□□ -0.8
SNX13-202ENST00000409604 UBE2J1Q9Y385 318 aaPredicted RBP10.04□□□□□ -0.8
SNX13-202ENST00000409604 NAV2Q8IVL1 2488 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 LYRM1O43325 122 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 LMX1BO60663 402 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 GLRA1P23415 457 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 FOXG1P55316 489 aaPredicted RBP10.04□□□□□ -0.8
SNX13-202ENST00000409604 GUCA2AQ02747 115 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 FAM214BQ7L5A3 538 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 OR52N4Q8NGI2 321 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 OR52H1Q8NGJ2 320 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 ACOT12Q8WYK0 555 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 OR2J1Q9GZK6 312 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 FRRS1LQ9P0K9 344 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 GPR160Q9UJ42 338 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 TUBAL3A6NHL2 446 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 LINC01387J3KSC0 135 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 CPEP16870 476 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 BCAP31P51572 246 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 CEBPGP53567 150 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 CCL8P80075 99 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 SLC9A3R2Q15599 337 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 THOC7Q6I9Y2 204 aaKnown RBP10.04□□□□□ -0.8
SNX13-202ENST00000409604 BTLAQ7Z6A9 289 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 NRARPQ7Z6K4 114 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 FBXL14Q8N1E6 418 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 OR2B2Q9GZK3 357 aa10.04□□□□□ -0.8
SNX13-202ENST00000409604 EFNA2O43921 213 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 NME2P1O60361 137 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 DXOO77932 396 aaKnown RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 ACSM4P0C7M7 580 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 GABRA1P14867 456 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 NME2P22392 152 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 RBMXP38159 391 aaKnown RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 NANOS3P60323 173 aaKnown RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 PDZD9Q8IXQ8 264 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 OR2M2Q96R28 347 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 OR2S2Q9NQN1 319 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 NDUFB11Q9NX14 153 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 DIRAS3O95661 229 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 IL7P13232 177 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 HOXB9P17482 250 aaPredicted RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 ACHEP22303 614 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 PRKACBP22694 351 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 EGR3Q06889 387 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 SYS1Q8N2H4 156 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 ZNF175Q9Y473 711 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 CLDN16Q9Y5I7 305 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 HRGP04196 525 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 RPS4Y1P22090 263 aaKnown RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 CDK2P24941 298 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 CD40LGP29965 261 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 RFX2P48378 723 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 DGCR2P98153 550 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 TPBGQ13641 420 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 FXNQ16595 210 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 CD300LDQ6UXZ3 194 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 BPIFB2Q8N4F0 458 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 MNTQ99583 582 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 ZNF629Q9UEG4 869 aaPredicted RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 ZNF391Q9UJN7 358 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 NAV3Q8IVL0 2385 aa10.03□□□□□ -0.8
SNX13-202ENST00000409604 NUP210Q8TEM1 1887 aaPredicted RBP10.03□□□□□ -0.8
SNX13-202ENST00000409604 ABCD4O14678 606 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 DEGS1O15121 323 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 TRAF3IP2O43734 574 aaPredicted RBP10.02□□□□□ -0.8
SNX13-202ENST00000409604 SULT1C4O75897 302 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 PMS2P2O95744 297 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 NGFP01138 241 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 ATF1P18846 271 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 GDNFP39905 211 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 SLC25A1P53007 311 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 PSMA6P60900 246 aaKnown RBP10.02□□□□□ -0.8
SNX13-202ENST00000409604 BHLHA15Q7RTS1 189 aaPredicted RBP10.02□□□□□ -0.8
SNX13-202ENST00000409604 GLCCI1Q86VQ1 547 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 OR4K15Q8NH41 348 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 KCNG3Q8TAE7 436 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 PIK3IP1Q96FE7 263 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 DOK1Q99704 481 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 ZMIZ1Q9ULJ6 1067 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 RNF150Q9ULK6 438 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 ST3GAL6Q9Y274 331 aa10.02□□□□□ -0.8
SNX13-202ENST00000409604 LAMA1P25391 3075 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 A0A087WV48 116 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 MEIKINA0A087WXM9 373 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 ZNF254O75437 659 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 PNPP00491 289 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 HOXB5P09067 269 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms