RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 SP6Q3SY56 376 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 DRAM2Q6UX65 266 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 DPPA2Q7Z7J5 298 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CCDC54Q8NEL0 328 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 SLC2A12Q8TD20 617 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 FAM131CQ96AQ9 280 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 DGAT2Q96PD7 388 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 TCEAL7Q9BRU2 100 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 A0A1W2PP11 408 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 C5orf52A6NGY3 159 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 AP4M1O00189 453 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 FOXS1O43638 330 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CYTIPO60759 359 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 UPK3AO75631 287 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 AMY2BP19961 511 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 ACKR3P25106 362 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CCR5P51681 352 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 FXYD4P59646 89 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 RIPPLY1Q0D2K3 151 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 ECH1Q13011 328 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 MLC1Q15049 377 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 SURF2Q15527 256 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CPEB2Q7Z5Q1 589 aaKnown RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 GPX8Q8TED1 209 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 REEP6Q96HR9 211 aa11.56□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF587Q96SQ5 575 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-202ENST00000409251 CUL9Q8IWT3 2517 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 K7EPK0 472 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 IFNA17P01571 189 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 CAPZBP47756 277 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SULT1A1P50225 295 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 TRA2BP62995 288 aaKnown RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 RPL18Q07020 188 aaKnown RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 GAMTQ14353 236 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 TMEM225Q6GV28 225 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 EIF5AL1Q6IS14 154 aaKnown RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 UNQ6494/PRO21346Q6UXR6 183 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SLC16A9Q7RTY1 509 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 BATF2Q8N1L9 274 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 FAM71E2Q8N5Q1 922 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SUMF1Q8NBK3 374 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 OR4D6Q8NGJ1 314 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 NICN1Q9BSH3 213 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SEC61A2Q9H9S3 476 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 TMEM212A6NML5 194 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SLC17A2O00624 439 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 MT-ND4LP03901 98 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 KIR3DL2P43630 455 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 CAV2P51636 162 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 EMP2P54851 167 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 FIP1L1Q6UN15 594 aaKnown RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 DPY19L2P2Q6ZN68 376 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 ANKRD9Q96BM1 317 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 KTI12Q96EK9 354 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 LAMA5O15230 3695 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SNAPC5O75971 98 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 SCAF4O95104 1147 aaKnown RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 Q3ZCU0 254 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 PYY3Q5JQD4 70 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 AKR1C8PQ5T2L2 129 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 TM4SF19Q96DZ7 209 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 FAM71F1Q96KD3 344 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 OR10C1Q96KK4 312 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 G6PC3Q9BUM1 346 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 GAR1Q9NY12 217 aaKnown RBP11.55□□□□□ -0.56
PTPRN-202ENST00000409251 RHBDD3Q9Y3P4 386 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 RFNGQ9Y644 331 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 POLEQ07864 2286 aa11.55□□□□□ -0.56
PTPRN-202ENST00000409251 C17orf105B2RV13 164 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 CD74P04233 296 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 CD14P08571 375 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 HCKP08631 526 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 RIDAP52758 137 aaKnown RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 NSDHLQ15738 373 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 RNASE11Q8TAA1 199 aaKnown RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 GPR119Q8TDV5 335 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 INTS12Q96CB8 462 aaKnown RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 GUCD1Q96NT3 240 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 ADOQ96SZ5 270 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 PTGES2Q9H7Z7 377 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 HAO2Q9NYQ3 351 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 WIF1Q9Y5W5 379 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF318Q5VUA4 2279 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 A0A087X0M5 115 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 TMEM269A0A1B0GVZ9 245 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 A0A1B0GX30 115 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 BTBD17A6NE02 478 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF726A6NNF4 738 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 CLDN4O14493 209 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 PIAS2O75928 621 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 IGKV1D-16P01601 117 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 SELLP14151 372 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 FCGR2CP31995 323 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 RAB5CP51148 216 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 PRSS12P56730 875 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 CSNK2A1P68400 391 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 NKX6-1P78426 367 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 MEF2DQ14814 521 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 BATFQ16520 125 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 PHF19Q5T6S3 580 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms