RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 SLC16A12Q6ZSM3 486 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 PRSS21Q9Y6M0 314 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 MED12Q93074 2177 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 CSF2RBP32927 897 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 LIPNQ5VXI9 398 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 SIGIRRQ6IA17 410 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 SLC45A2Q9UMX9 530 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 SPTA1P02549 2419 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 AP4M1O00189 453 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 GPR37O15354 613 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 PMCHP20382 165 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 PPP1CAP62136 330 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 TMEM241Q24JQ0 296 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 K7ERU9 68 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 OR2J3O76001 311 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 C1SP09871 688 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 OR6S1Q8NH40 331 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 HMSDA8MTL9 139 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 M0R1X1 148 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 MDH2P40926 338 aaKnown RBP11.04□□□□□ -0.64
SHANK2-203ENST00000409161 ARIH2OSQ8N7S6 290 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 ZNF511Q8NB15 262 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 MRPS24Q96EL2 167 aaKnown RBP11.04□□□□□ -0.64
SHANK2-203ENST00000409161 MAP1LC3CQ9BXW4 147 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 PDLIM7Q9NR12 457 aa11.04□□□□□ -0.64
SHANK2-203ENST00000409161 TARM1B6A8C7 271 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 SELENBP1Q13228 472 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CLN3Q13286 438 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 SCD5Q86SK9 330 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 A0A087WV62 115 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 HRASP01112 189 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 FPR2P25090 351 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CTBSQ01459 385 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 DOCK10Q96BY6 2186 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 GATCO43716 136 aaKnown RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 EPXP11678 715 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 NQO2P16083 231 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 HIST1H1CP16403 213 aaKnown RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 RACK1P63244 317 aaKnown RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 DHRS7BQ6IAN0 325 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 ABHD17CQ6PCB6 329 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 UBALD1Q8TB05 177 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 OCIAD1Q9NX40 245 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 A0A087X0M5 115 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 A0A1B0GX30 115 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 FAM71E1Q6IPT2 247 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 RNASEKQ6P5S7 137 aaKnown RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 Q6ZN92 141 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 LRP11Q86VZ4 500 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 OR10AD1Q8NGE0 317 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 YIPF6Q96EC8 236 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 PDXPQ96GD0 296 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 TMEM56Q96MV1 263 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 SEBOXQ9HB31 216 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 GP1BAP07359 652 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 PSMB5P28074 263 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 HOXD9P28356 352 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 SMAGPQ0VAQ4 97 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 KIAA1958Q8N8K9 716 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 EXTL1Q92935 676 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 WDR89Q96FK6 387 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 LAT2Q9GZY6 243 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CDCP1Q9H5V8 836 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 EFSO43281 561 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 PPOXP50336 477 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CLDN2P57739 230 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 STAC2Q6ZMT1 411 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CMTM4Q8IZR5 234 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 ATP5SQ99766 215 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 ADAT1Q9BUB4 502 aaKnown RBP11.03□□□□□ -0.64
SHANK2-203ENST00000409161 TMEM231Q9H6L2 316 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 DUSP13Q9UII6 198 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CD207Q9UJ71 328 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 ZNF835Q9Y2P0 537 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 TIMP1P01033 207 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 RGRP47804 291 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CLDN15P56746 228 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 PRR27Q6MZM9 219 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 DLEU7Q6UYE1 221 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 TXNIPQ9H3M7 391 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 BMPR1BO00238 502 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 GPNMBQ14956 572 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 ZNF343Q6P1L6 599 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 PELI1Q96FA3 418 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 FAM210BQ96KR6 192 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 C19orf43Q9BQ61 176 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 GPR84Q9NQS5 396 aa11.03□□□□□ -0.64
SHANK2-203ENST00000409161 CRISP2P16562 243 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 CDK5R1Q15078 307 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 ARFGAP1Q8N6T3 406 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 OR6C1Q96RD1 312 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 FGF20Q9NP95 211 aaPredicted RBP11.02□□□□□ -0.64
SHANK2-203ENST00000409161 FCN1O00602 326 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 RPLP1P05386 114 aaKnown RBP11.02□□□□□ -0.64
SHANK2-203ENST00000409161 FGF2P09038 288 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 BMP5P22003 454 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 FUT6P51993 359 aa11.02□□□□□ -0.64
SHANK2-203ENST00000409161 LIM2P55344 173 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms