RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 DEFB108AA8MXU0 73 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 H3BSA7 217 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 CCRL2O00421 344 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 PLPP2O43688 288 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 GPX5O75715 221 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 CRYAAP02489 173 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 APOC1P02654 83 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 PTAFRP25105 342 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 THBS4P35443 961 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 MPV17P39210 176 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 FABP6P51161 128 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 CCR9P51686 369 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 PPP1CBP62140 327 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 RPS11P62280 158 aaKnown RBP eCLIP7.17□□□□□ -1.26
GPC3-203ENST00000406757 FABP5Q01469 135 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 SNTB2Q13425 540 aaKnown RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 BLMHQ13867 455 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 DAZAP2Q15038 168 aaPredicted RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 ALKBH6Q3KRA9 238 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 CCDC58Q4VC31 144 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 TMEM255AQ5JRV8 349 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 GPR107Q5VW38 600 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 SLC22A25Q6T423 547 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 TMEM108Q6UXF1 575 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 COLCA1Q6ZS62 124 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 GPR141Q7Z602 305 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 LRP11Q86VZ4 500 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 OR5AS1Q8N127 324 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 LINC00528Q8N1L1 170 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 FAM169BQ8N8A8 192 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 OR13F1Q8NGS4 319 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 RPL3LQ92901 407 aaKnown RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 APOBEC3DQ96AK3 386 aaPredicted RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 CMBLQ96DG6 245 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 SMIM19Q96E16 107 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 TRMT61AQ96FX7 289 aaKnown RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 FUNDC2Q9BWH2 189 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 OR2J1Q9GZK6 312 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 PPP1R3EQ9H7J1 279 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 EXOSC4Q9NPD3 245 aaKnown RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 ISYNA1Q9NPH2 558 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 NUFIP1Q9UHK0 495 aaKnown RBP7.17□□□□□ -1.26
GPC3-203ENST00000406757 ATPIF1Q9UII2 106 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 ZNF281Q9Y2X9 895 aa7.17□□□□□ -1.26
GPC3-203ENST00000406757 HEATR1Q9H583 2144 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 LOC100506127A0A0U1RQW1 187 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 A0A1B0GVI7 797 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 DPPA5A6NC42 116 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 ACOD1A6NK06 481 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 SHISA9B4DS77 424 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 E7EQL1 145 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 SYT7O43581 403 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 LILRA1O75019 489 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 CD3EP07766 207 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 LOXP28300 417 aaPredicted RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 RAD52P43351 418 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 TAS2R43P59537 309 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 FAM3AP98173 230 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 BDH1Q02338 343 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 MRPL28Q13084 256 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 TNK1Q13470 666 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 GK2Q14410 553 aaPredicted RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 C3orf36Q3SXR2 165 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 ACSM3Q53FZ2 586 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 FAM27D1Q5T7N8 215 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 OR2T2Q6IF00 324 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 ZNF544Q6NX49 715 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 ZNF704Q6ZNC4 412 aaPredicted RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 TMEM91Q6ZNR0 172 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 MRPL21Q7Z2W9 205 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 CEACAM19Q7Z692 300 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 CLVS1Q8IUQ0 354 aaPredicted RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 OR14K1Q8NGZ2 314 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 LILRB1Q8NHL6 650 aaPredicted RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 RPS4Y2Q8TD47 263 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 TSEN15Q8WW01 171 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 DVL3Q92997 716 aaPredicted RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 FGGYQ96C11 551 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 C18orf12Q96KH6 178 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 OR14A2Q96R54 314 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 SYT3Q9BQG1 590 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 CHCHD6Q9BRQ6 235 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 COMMD4Q9H0A8 199 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 PPIL3Q9H2H8 161 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 ESRP2Q9H6T0 727 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 PLEKHF2Q9H8W4 249 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 NGBQ9NPG2 151 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 TBCCD1Q9NVR7 557 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 MYEF2Q9P2K5 600 aaKnown RBP7.16□□□□□ -1.26
GPC3-203ENST00000406757 DUSP13Q9UII6 198 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 POU2F3Q9UKI9 436 aa7.16□□□□□ -1.26
GPC3-203ENST00000406757 ACANP16112 2415 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 A0A1W2PPR1 153 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 SMIM30A4D0T7 59 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 CCDC160A6NGH7 325 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 GGT3PA6NGU5 568 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 TMEM212A6NML5 194 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 GABRPO00591 440 aa7.15□□□□□ -1.26
GPC3-203ENST00000406757 PIN1P1O15428 100 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms