RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 OR2T2Q6IF00 324 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 UNQ9370/PRO34162Q6UXP9 181 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 LRP11Q86VZ4 500 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 COMMD2Q86X83 199 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 FBXL14Q8N1E6 418 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF611Q8N823 705 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 SEMA6DQ8NFY4 1073 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 FAM71F1Q96KD3 344 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-201ENST00000404210 PLK3Q9H4B4 646 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 GPR160Q9UJ42 338 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 FBXO9Q9UK97 447 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-201ENST00000404210 DOPEY2Q9Y3R5 2298 aa10.55□□□□□ -0.72
LINC00339-201ENST00000404210 TRBV5-5A0A0J9YX44 114 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 SERPINA3P01011 423 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 DANCRP0C864 163 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 GABRA5P31644 462 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 MST1LQ2TV78 715 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 ALKBH6Q3KRA9 238 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 Q499Y3 187 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 MUC15Q8N387 334 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 OR8G5Q8NG78 346 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 OR10AC1Q8NH08 325 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 RGP1Q92546 391 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-201ENST00000404210 THRSPQ92748 146 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 CLEC4MQ9H2X3 399 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-201ENST00000404210 PLEKHF2Q9H8W4 249 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 CYSLTR2Q9NS75 346 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF275Q9NSD4 429 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-201ENST00000404210 FAIMQ9NVQ4 179 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 NDUFB11Q9NX14 153 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 TAAR3PQ9P1P4 343 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 CGGBP1Q9UFW8 167 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-201ENST00000404210 FZR1Q9UM11 496 aa10.54□□□□□ -0.72
LINC00339-201ENST00000404210 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-201ENST00000404210 ABCA4P78363 2273 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 ZNF816-ZNF321PA0A0X1KG74 233 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-201ENST00000404210 SC5DO75845 299 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 GATBO75879 557 aaKnown RBP10.53□□□□□ -0.72
LINC00339-201ENST00000404210 CST4P01036 141 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 HLA-DPB1P04440 258 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 GALP22466 123 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 ACKR3P25106 362 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 RPS25P62851 125 aaKnown RBP10.53□□□□□ -0.72
LINC00339-201ENST00000404210 ACSM3Q53FZ2 586 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 TMEM255AQ5JRV8 349 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 AGAP6Q5VW22 663 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 FTMTQ8N4E7 242 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 OR56B2PQ8NGI1 322 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 OR51A4Q8NGJ6 313 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 OR13C3Q8NGS6 347 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 FGGYQ96C11 551 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 YIPF6Q96EC8 236 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 SYT3Q9BQG1 590 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 TMED9Q9BVK6 235 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 SLC22A4Q9H015 551 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 CBLN4Q9NTU7 201 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 TMEM100Q9NV29 134 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
LINC00339-201ENST00000404210 MYEF2Q9P2K5 600 aaKnown RBP10.53□□□□□ -0.72
LINC00339-201ENST00000404210 ENPP5Q9UJA9 477 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 DHDHQ9UQ10 334 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
LINC00339-201ENST00000404210 HELZ2Q9BYK8 2649 aaKnown RBP10.52□□□□□ -0.73
LINC00339-201ENST00000404210 A0A1B0GWJ7 208 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TRDV1A0A1B0GX56 115 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 ZNF879B4DU55 563 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 H3BSH0 61 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 CD8AP01732 235 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 RAF1P04049 648 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 CD2P06729 351 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 OCM2P0CE71 109 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 CD36P16671 472 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
LINC00339-201ENST00000404210 MAGEB1P43366 347 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 MMP15P51511 669 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 PRSS12P56730 875 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 CD200R1LQ6Q8B3 271 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 PAMR1Q6UXH9 720 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TMEM91Q6ZNR0 172 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TMEM200AQ86VY9 491 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 SERPINA12Q8IW75 414 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 OR5AS1Q8N127 324 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 PARP16Q8N5Y8 322 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 OR13G1Q8NGZ3 307 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TSEN15Q8WW01 171 aaKnown RBP10.52□□□□□ -0.73
LINC00339-201ENST00000404210 PP6455Q8WZ26 134 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 PIGCQ92535 297 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 PIGTQ969N2 578 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TMEM203Q969S6 136 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 TMIGD2Q96BF3 282 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 SLC30A2Q9BRI3 323 aa10.52□□□□□ -0.73
LINC00339-201ENST00000404210 MS4A5Q9H3V2 200 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms