RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ATF6BQ99941 703 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 WDR13Q9H1Z4 485 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RANBP3Q9H6Z4 567 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ELL3Q9HB65 397 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TRIM36Q9NQ86 728 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MRPL22Q9NWU5 206 aaKnown RBP9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CYB5R1Q9UHQ9 305 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CAPN7Q9Y6W3 813 aa9.63□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ANGPT2O15123 496 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CENPAP49450 140 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ERVFRD-1P60508 538 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 COL10A1Q03692 680 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ACSM1Q08AH1 577 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TRAM2Q15035 370 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DEFB121Q5J5C9 76 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ATPAF1Q5TC12 328 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RNF113BQ8IZP6 322 aaKnown RBP9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LNX2Q8N448 690 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SPERTQ8NA61 448 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ZNRF4Q8WWF5 429 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CLPTM1LQ96KA5 538 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GAFA1Q96PS6 74 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NKX3-1Q99801 234 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 FGF23Q9GZV9 251 aaPredicted RBP9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SLC22A4Q9H015 551 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SRA1Q9HD15 236 aaKnown RBP9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SNTG1Q9NSN8 517 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NKIRAS1Q9NYS0 192 aa9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MRPL15Q9P015 296 aaKnown RBP9.62□□□□□ -0.87
SPTLC1P3-201ENST00000403408 M0R135 149 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NDUFB2O95178 105 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SLC2A1P11166 492 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MUC1P15941 1255 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OTX1P32242 354 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OMPP47874 163 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RAB13P51153 203 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GMFBP60983 142 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SELENOWP63302 87 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MALLQ13021 153 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RFX4Q33E94 735 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TCTEX1D4Q5JR98 221 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LDLRAD2Q5SZI1 272 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GPR139Q6DWJ6 353 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 PGBD2Q6P3X8 592 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ZNF730Q6ZMV8 503 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CMTM4Q8IZR5 234 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 C11orf42Q8N5U0 333 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 PAPD5Q8NDF8 572 aaKnown RBP9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR1M1Q8NGA1 313 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR51G2Q8NGK0 314 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 H1FXQ92522 213 aaKnown RBP9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ZNF799Q96GE5 643 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DMRTB1Q96MA1 342 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR5M11Q96RB7 305 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 FNDC11Q9BVV2 318 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CDCA4Q9BXL8 241 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 FN3KQ9H479 309 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 RNPEPL1Q9HAU8 725 aa9.61□□□□□ -0.87
SPTLC1P3-201ENST00000403408 A0A1W2PRX2 142 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GGT3PA6NGU5 568 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 M0R1W7 72 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NDUFB3O43676 98 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 VIMP08670 466 aaKnown RBP9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MXRA7P84157 204 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SEC23BQ15437 767 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 MICBQ29980 383 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 KLHL12Q53G59 568 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ZNF788Q6ZQV5 615 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ADCK1Q86TW2 530 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TSPEARQ8WU66 669 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DUS3LQ96G46 650 aaKnown RBP9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NMNAT3Q96T66 252 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DDOQ99489 341 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 METTL8Q9H825 291 aaKnown RBP9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TMBIM4Q9HC24 238 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 GAR1Q9NY12 217 aaKnown RBP9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ZNF391Q9UJN7 358 aa9.6□□□□□ -0.87
SPTLC1P3-201ENST00000403408 OR6C68A6NDL8 312 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 BHLHE40O14503 412 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CDIPTO14735 213 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 JUNBP17275 347 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CD33P20138 364 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 TPTEP56180 551 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 BLCAPP62952 87 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 CD83Q01151 205 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ECH1Q13011 328 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 AANATQ16613 207 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 DPY19L2P2Q6ZN68 376 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 SLC36A1Q7Z2H8 476 aa9.59□□□□□ -0.87
SPTLC1P3-201ENST00000403408 ZBTB46Q86UZ6 589 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms