RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 CCR9P51686 369 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 CHN2P52757 468 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ZNF121P58317 390 aaPredicted RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 RPS23P62266 143 aaKnown RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 SRSF2Q01130 221 aaKnown RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 BDH1Q02338 343 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 MFGE8Q08431 387 aaPredicted RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 EFNB3Q15768 340 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ZNF829Q3KNS6 432 aaPredicted RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 SNAI3Q3KNW1 292 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 CCDC58Q4VC31 144 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ZNF544Q6NX49 715 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 VHLLQ6RSH7 139 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 UNQ6126/PRO20091Q6UXV3 157 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 KRT77Q7Z794 578 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 CATSPERDQ86XM0 798 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ELMOD2Q8IZ81 293 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 STX19Q8N4C7 294 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 KLHL36Q8N4N3 616 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 SNX33Q8WV41 574 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 C4orf36Q96KX1 117 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 NR1H4Q96RI1 486 aaPredicted RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 TRAF4Q9BUZ4 470 aaPredicted RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 OPA3Q9H6K4 179 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ZNF696Q9H7X3 374 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 SP140LQ9H930 580 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ISG20L2Q9H9L3 353 aaKnown RBP7.86□□□□□ -1.15
VPS53-203ENST00000401468 CA10Q9NS85 328 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ZNF319Q9P2F9 582 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ERVK-18Q9QC07 812 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 ZNF391Q9UJN7 358 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 STARD10Q9Y365 291 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 SPEF1Q9Y4P9 236 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 R4GMQ9 66 aa7.86□□□□□ -1.15
VPS53-203ENST00000401468 WNK2Q9Y3S1 2297 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TMEM269A0A1B0GVZ9 245 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 MEGF11A6BM72 1044 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 C5orf63A6NC05 138 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 PSMD9O00233 223 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 OGG1O15527 345 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 PAX4O43316 350 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 XRCC2O43543 280 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TNFAIP8O95379 198 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TTRP02766 147 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 MT-ND2P03891 347 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 MT-ND5P03915 603 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 ISG15P05161 165 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 CD1AP06126 327 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 KITLGP21583 273 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 PCMT1P22061 227 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 CCL1P22362 96 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 THBS4P35443 961 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 KIR3DL2P43630 455 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 FABP6P51161 128 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 PRKXP51817 358 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 WNT4P56705 351 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 NANOS3P60323 173 aaKnown RBP7.85□□□□□ -1.15
VPS53-203ENST00000401468 PPP1CBP62140 327 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 GALK2Q01415 458 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 SNTB2Q13425 540 aaKnown RBP7.85□□□□□ -1.15
VPS53-203ENST00000401468 TAF13Q15543 124 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 ADIPOQQ15848 244 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 CARTPTQ16568 116 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 MST1LQ2TV78 715 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TP53I3Q53FA7 332 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TMEM255AQ5JRV8 349 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 C11orf71Q6IPW1 123 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TMPRSS11AQ6ZMR5 421 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 IL17RELQ6ZVW7 336 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 SPATC1Q76KD6 591 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 DTX2Q86UW9 622 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.85□□□□□ -1.15
VPS53-203ENST00000401468 PRSS35Q8N3Z0 413 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 ZNF525Q8N782 197 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 ZNF283Q8N7M2 679 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 OR5L1Q8NGL2 311 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 OR2G2Q8NGZ5 317 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 MRPL24Q96A35 216 aaKnown RBP7.85□□□□□ -1.15
VPS53-203ENST00000401468 DHRS9Q9BPW9 319 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 KCNS3Q9BQ31 491 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 MND1Q9BWT6 205 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 REG4Q9BYZ8 158 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 TTTY10Q9BZA0 68 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 POFUT1Q9H488 388 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 RGCCQ9H4X1 137 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 ISYNA1Q9NPH2 558 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 YAE1D1Q9NRH1 226 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 ACOXLQ9NUZ1 547 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 BABAM2Q9NXR7 383 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 EIF3KQ9UBQ5 218 aaKnown RBP7.85□□□□□ -1.15
VPS53-203ENST00000401468 GNG8Q9UK08 70 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 IKZF2Q9UKS7 526 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 GRIP1Q9Y3R0 1128 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 SNX5Q9Y5X3 404 aa7.85□□□□□ -1.15
VPS53-203ENST00000401468 hCG_38984A0A1B0GV85 526 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 LOC390937A0A1W2PQ73 354 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 OR4C45A6NMZ5 311 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 DHRS7CA6NNS2 312 aa7.84□□□□□ -1.15
VPS53-203ENST00000401468 E9PI62 339 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms