RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 OR2M7Q8NG81 312 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 UBQLN2Q9UHD9 624 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 BRCA2P51587 3418 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 PLSCR5A0PG75 271 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 SLC34A2O95436 690 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 TRAPPC2P0DI81 140 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 TRAPPC2BP0DI82 140 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 TBC1D28Q2M2D7 210 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 TRILQ7L0X0 811 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 CATSPERDQ86XM0 798 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 OR4C16Q8NGL9 310 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 OR1J2Q8NGS2 313 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 PP6455Q8WZ26 134 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF286AQ9HBT8 521 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 MRPL22Q9NWU5 206 aaKnown RBP12.44□□□□□ -0.42
SCAF4-202ENST00000399804 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 SPEF1Q9Y4P9 236 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 MCRIP1C9JLW8 97 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 PET100P0DJ07 73 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 ARR3P36575 388 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 FOXC1Q12948 553 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 RAB35Q15286 201 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 CD276Q5ZPR3 534 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 C3P1Q6ZMU1 363 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 CMBLQ96DG6 245 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 CMTM3Q96MX0 182 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 SF3B5Q9BWJ5 86 aaKnown RBP12.44□□□□□ -0.42
SCAF4-202ENST00000399804 NMNAT2Q9BZQ4 307 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 DNTTIP1Q9H147 329 aa12.44□□□□□ -0.42
SCAF4-202ENST00000399804 BET1O15155 118 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 FTH1P19P0C7X4 201 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF883P0CG24 379 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 MGMTP16455 207 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 RAD52P43351 418 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 KIR3DL2P43630 455 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 MMP16P51512 607 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 CDK10Q15131 360 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 ACTBL2Q562R1 376 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 PABPC1L2AQ5JQF8 200 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 EIF5AL1Q6IS14 154 aaKnown RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 ANKRD16Q6P6B7 361 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 LIN37Q96GY3 246 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 KCNK17Q96T54 332 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 PTDSS2Q9BVG9 487 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 PRMT8Q9NR22 394 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 TMEM272A0A1B0GTI8 110 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 SNAPC5O75971 98 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 PNPP00491 289 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 HOXD11P31277 338 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 LSM6P62312 80 aaKnown RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 CYCSP99999 105 aaKnown RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 WDSUB1Q8N9V3 476 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 CCDC54Q8NEL0 328 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 MAFIPQ8WZ33 124 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 YIPF5Q969M3 257 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 FOXJ2Q9P0K8 574 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 OBSL1O75147 1896 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 KIAA1671Q9BY89 1806 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 PLA2G10O15496 165 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 XRCC2O43543 280 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 UPK3AO75631 287 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 CTAG2O75638 210 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 FAM157BP0CG42 384 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 UBE2MP61081 183 aaKnown RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 LINC00303Q3SY05 128 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 MEX3BQ6ZN04 569 aaKnown RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 CNTD2Q9H8S5 307 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 BCO1Q9HAY6 547 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 SPTAN1Q13813 2472 aaKnown RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 SDCBPO00560 298 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 TIMM8AO60220 97 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF354AO60765 605 aaPredicted RBP12.43□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF806P0C7X5 589 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 OPRM1P35372 400 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 SORDQ00796 357 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 KISS1Q15726 138 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 SLC25A26Q70HW3 274 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 TUSC5Q8IXB3 177 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 OR4S1Q8NGB4 309 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 OR10R2Q8NGX6 335 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 NICN1Q9BSH3 213 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 PPP1R3EQ9H7J1 279 aa12.43□□□□□ -0.42
SCAF4-202ENST00000399804 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 MKRN2OSH3BPM6 223 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 TK1P04183 234 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 UMODP07911 640 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 EDN3P14138 238 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 ZNF519Q8TB69 540 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 PCNPQ8WW12 178 aaKnown RBP12.42□□□□□ -0.42
SCAF4-202ENST00000399804 KLHDC3Q9BQ90 382 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
SCAF4-202ENST00000399804 PLXNB3Q9ULL4 1909 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 FAM221AA4D161 298 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 DHRS3O75911 302 aa12.42□□□□□ -0.42
SCAF4-202ENST00000399804 THBS4P35443 961 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms