RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 GVQW1Q8N7I0 195 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 GSN-AS1Q9NRJ2 163 aa13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
RPRD1A-202ENST00000399022 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 SPTY2D1-AS1A0A0U1RR47 76 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 TMEM272A0A1B0GTI8 110 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 RPL18Q07020 188 aaKnown RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 ABI3Q9P2A4 366 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 GDF2Q9UK05 429 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 A0A1W2PPC4 97 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 K7EQS6 105 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 TMEM176BQ3YBM2 270 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 TMEM164Q5U3C3 297 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 SGCZQ96LD1 299 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 SBF1O95248 1867 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 GVINP1Q7Z2Y8 2422 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 TGOLN2O43493 480 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 MUC1P15941 1255 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 WDR38Q5JTN6 314 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 OR5L1Q8NGL2 311 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 FKRPQ9H9S5 495 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 PLEKHA2Q9HB19 425 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 PRR13Q9NZ81 148 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 NXT1Q9UKK6 140 aaKnown RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 PQLC2LA1A4F0 135 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 BLACEA4D250 179 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 OR6C6A6NF89 314 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 RAB27BO00194 218 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 FCGR2AP12318 317 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 CALCRP30988 508 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 POLR2HP52434 150 aaKnown RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 RNF151Q2KHN1 245 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 ZDHHC22Q8N966 263 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 PIK3IP1Q96FE7 263 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 BORCS8Q96FH0 119 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 LIN37Q96GY3 246 aaPredicted RBP13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 AP1S3Q96PC3 154 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 SLC35B3Q9H1N7 401 aa13.12□□□□□ -0.31
RPRD1A-202ENST00000399022 IGKV1-8A0A0C4DH67 115 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 LAMTOR5O43504 91 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 ICOSLGO75144 302 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 DUS4LO95620 317 aaKnown RBP13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 EGR3Q06889 387 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF426Q9BUY5 554 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF275Q9NSD4 429 aaPredicted RBP13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 C19orf12Q9NSK7 152 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 SUSD2Q9UGT4 822 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 C2CD4DB7Z1M9 353 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 OR2A4O95047 310 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 CAPZBP47756 277 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 SULT1A1P50225 295 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 H3F3AP84243 136 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 DLX2Q07687 328 aaPredicted RBP13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 PPP1R3BQ86XI6 285 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 OR2A7Q96R45 310 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 ZNF2Q9BSG1 426 aaPredicted RBP13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 TRAV8-7A0A075B6U6 113 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 H7BYZ3 331 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 LGI3Q8N145 548 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 CLEC1AQ8NC01 280 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 FAM174AQ8TBP5 190 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 RHOVQ96L33 236 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 PLEK2Q9NYT0 353 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 WASF3Q9UPY6 502 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
RPRD1A-202ENST00000399022 E5RGE8 158 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 ZFAND5O76080 213 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 IL33O95760 270 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 SERPINA7P05543 415 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 EFNB2P52799 333 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 BIDP55957 195 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 SRYQ05066 204 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 SKP2Q13309 424 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 C1orf140Q5VVS0 124 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 LYSMD4Q5XG99 296 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 PRSS54Q6PEW0 395 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 KCNIP4Q6PIL6 250 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 LCN15Q6UWW0 184 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 TMPPEQ6ZT21 453 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 ZAR1Q86SH2 424 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 RFLNBQ8N5W9 214 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 OR10AC1Q8NH08 325 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 EMG1Q92979 244 aaKnown RBP13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 PRRX2Q99811 253 aa13.1□□□□□ -0.31
RPRD1A-202ENST00000399022 LRRC61Q9BV99 259 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms