RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 A0A1W2PPC4 97 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 H3BP45 60 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 CRXO43186 299 aaPredicted RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR7C2O60412 319 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 IGHV3-43DP0DP04 118 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 NKX2-1P43699 371 aaPredicted RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 RAB13P51153 203 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 PCBP4P57723 403 aaKnown RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR5I1Q13606 314 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 IL10RAQ13651 578 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 SAXO2Q658L1 398 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 NCR3LG1Q68D85 454 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 H1FNTQ75WM6 255 aaPredicted RBP8.46□□□□□ -1.06
ATL3-201ENST00000398868 H2BFWTQ7Z2G1 175 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR10G3Q8NGC4 313 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 OR6S1Q8NH40 331 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 C16orf52Q8NHV5 167 aa8.46□□□□□ -1.06
ATL3-201ENST00000398868 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A6P0DMU7 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A5P0DMU8 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A7P0DMV0 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A8P0DMV1 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A9P0DMV2 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CCR9P51686 369 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 PRDX4Q13162 271 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A2Q5DJT8 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A1Q5HYN5 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CD300LGQ6UXG3 332 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 LSMEM2Q8N112 164 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 FBXL14Q8N1E6 418 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CT45A3Q8NHU0 189 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 EAF1Q96JC9 268 aaPredicted RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 RHNO1Q9BSD3 238 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 ADAM29Q9UKF5 820 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CACNA1GO43497 2377 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 A0A087X0M5 115 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 A0A1B0GX30 115 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 XKRY2A2RUG3 117 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 FIGNL2A6NMB9 653 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 SLC25A4P12235 298 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 NAGAP17050 411 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 RPL7P18124 248 aaKnown RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 SOX8P57073 446 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 STACQ99469 402 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 ZNF2Q9BSG1 426 aaPredicted RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 GAL3ST2Q9H3Q3 398 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 PRELID3BQ9Y3B1 194 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 GOSR1O95249 250 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 HIST1H1CP16403 213 aaKnown RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 FPR3P25089 353 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 HOXC13P31276 330 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 ARRB2P32121 409 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 MEOX1P50221 254 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 ERVFC1-1P60608 527 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 DCAF7P61962 342 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 TSPAN31Q12999 210 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 PRAMEF5Q5TYX0 476 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 PRAMEF6Q5VXH4 476 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CLDN22Q8N7P3 220 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 MRPS18BQ9Y676 258 aaKnown RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 IGHV5-51A0A0C4DH38 117 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 RNF212BA8MTL3 300 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 SLC16A6O15403 523 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CSF3P09919 207 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 HIST1H3AP68431 136 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 MBOAT2Q6ZWT7 520 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 MS4A6EQ96DS6 147 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 CPPED1Q9BRF8 314 aaPredicted RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 RHOFQ9HBH0 211 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 LIN7CQ9NUP9 197 aaKnown RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 CKAP5Q14008 2032 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 GPX5O75715 221 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 SLC6A12P48065 614 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 TPPP2P59282 170 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 OXA1LQ15070 435 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 KDF1Q8NAX2 398 aaPredicted RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 BCO1Q9HAY6 547 aa8.45□□□□□ -1.06
ATL3-201ENST00000398868 PLEKHB1Q9UF11 243 aaPredicted RBP8.45□□□□□ -1.06
ATL3-201ENST00000398868 GATCO43716 136 aaKnown RBP8.44□□□□□ -1.06
ATL3-201ENST00000398868 GIPP09681 153 aaPredicted RBP8.44□□□□□ -1.06
ATL3-201ENST00000398868 SLC35E2P0CK97 266 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 HOXB3P14651 431 aaPredicted RBP8.44□□□□□ -1.06
ATL3-201ENST00000398868 CPEP16870 476 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 RAB5AP20339 215 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 COL9A1P20849 921 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 ERVS71-1P61550 626 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 GUCA2AQ02747 115 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 THEM4Q5T1C6 240 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 ACOT7LQ6ZUV0 252 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 MRPS24Q96EL2 167 aaKnown RBP8.44□□□□□ -1.06
ATL3-201ENST00000398868 PRDM7Q9NQW5 492 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 INPP5EQ9NRR6 644 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 TRGV5A0A0B4J1U4 118 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 TMPRSS11DO60235 418 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 FCMRO60667 390 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 GYPAP02724 150 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 S100A7P31151 101 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 UBL7Q96S82 380 aaPredicted RBP8.44□□□□□ -1.06
ATL3-201ENST00000398868 OCIAD1Q9NX40 245 aa8.44□□□□□ -1.06
ATL3-201ENST00000398868 KLF13Q9Y2Y9 288 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms