RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 TCN2P20062 427 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 CD34P28906 385 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 CD96P40200 585 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 RAC3P60763 192 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 HIST1H3AP68431 136 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 CHAF1BQ13112 559 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 LY6G6FQ5SQ64 297 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 HIST2H3PS2Q5TEC6 136 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 LPCAT3Q6P1A2 487 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 HIST2H3AQ71DI3 136 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 TMUB2Q71RG4 321 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 SLC25A42Q86VD7 318 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 NAXDQ8IW45 347 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 C20orf196Q8IYI0 205 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 BEST3Q8N1M1 668 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 ZIC4Q8N9L1 334 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 OR14L1PQ8NHC6 308 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 PCNPQ8WW12 178 aaKnown RBP12.18□□□□□ -0.46
PRAME-202ENST00000398743 LYZL4Q96KX0 146 aa12.18□□□□□ -0.46
PRAME-202ENST00000398743 NOP16Q9Y3C1 178 aaKnown RBP12.18□□□□□ -0.46
PRAME-202ENST00000398743 C5orf63A6NC05 138 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 SMAD9O15198 467 aaKnown RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 CRTAPO75718 401 aaPredicted RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 APOC1P02654 83 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 IFNA6P05013 189 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 HIST1H1DP16402 221 aaKnown RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 OTX1P32242 354 aaPredicted RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 THBS4P35443 961 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 B3GALT5-AS1P59052 145 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 SORDQ00796 357 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 Q0VFX4 171 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 HLXQ14774 488 aaPredicted RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 NHLRC3Q5JS37 347 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 LIN54Q6MZP7 749 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 YRDCQ86U90 279 aaKnown RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 RTN4RL2Q86UN3 420 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 OR5M8Q8NGP6 311 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 KCNE4Q8WWG9 221 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 MRGPRFQ96AM1 343 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 URM1Q9BTM9 101 aaKnown RBP12.17□□□□□ -0.46
PRAME-202ENST00000398743 ARL6Q9H0F7 186 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 BANF2Q9H503 90 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 PLEK2Q9NYT0 353 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 V9GYS6 101 aa12.17□□□□□ -0.46
PRAME-202ENST00000398743 A0A0G2JMM0 328 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 A0A1W2PP11 408 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 A0A1W2PPB8 328 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 A0A1W2PRS3 328 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 KIR3DP1A8MWS1 328 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 M0R135 149 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 SOCS1O15524 211 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 HPP00738 406 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 PPP3CBP16298 524 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 MRPS34P82930 218 aaKnown RBP12.16□□□□□ -0.46
PRAME-202ENST00000398743 KISS1Q15726 138 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 PLAC9Q5JTB6 97 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 TOR2AQ5JU69 321 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 C6orf15Q6UXA7 325 aaPredicted RBP12.16□□□□□ -0.46
PRAME-202ENST00000398743 COMMD7Q86VX2 200 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 PP6455Q8WZ26 134 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 SPTSSAQ969W0 71 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 ZNF799Q96GE5 643 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
PRAME-202ENST00000398743 CST11Q9H112 138 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 GHRLQ9UBU3 117 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 EML6Q6ZMW3 1958 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 LIPCP11150 499 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 PRF1P14222 555 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 FGL1Q08830 312 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 SSPNQ14714 243 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 LYG2Q86SG7 212 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 KIF25Q9UIL4 384 aa12.16□□□□□ -0.46
PRAME-202ENST00000398743 MTRF1O75570 445 aaKnown RBP12.15□□□□□ -0.46
PRAME-202ENST00000398743 CD8AP01732 235 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 PMP2P02689 132 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 RPA2P15927 270 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 ZBTB25P24278 435 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 CARD18P57730 90 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
PRAME-202ENST00000398743 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 RSPO1Q2MKA7 263 aaPredicted RBP12.15□□□□□ -0.46
PRAME-202ENST00000398743 SFRP5Q5T4F7 317 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 TCEAL6Q6IPX3 200 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 FAHD2BQ6P2I3 314 aaPredicted RBP12.15□□□□□ -0.46
PRAME-202ENST00000398743 GGNQ86UU5 652 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 CCDC28AQ8IWP9 274 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 ESX1Q8N693 406 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 CCDC54Q8NEL0 328 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 OR5D18Q8NGL1 313 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 CT55Q8WUE5 264 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 TCEAL3Q969E4 200 aa12.15□□□□□ -0.46
PRAME-202ENST00000398743 ZNF775Q96BV0 537 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms