RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 EMC6Q9BV81 110 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 NXF5Q9H1B4 397 aaKnown RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 TCEAL2Q9H3H9 227 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 THAP10Q9P2Z0 257 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 MAFFQ9ULX9 164 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RCL1Q9Y2P8 373 aaKnown RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 SPTBN5Q9NRC6 3674 aaKnown RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 CELA2BP08218 269 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 H2BFMP0C1H6 154 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RAB5AP20339 215 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 CYCSP99999 105 aaKnown RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 SSBP1Q04837 148 aaKnown RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 ALG11Q2TAA5 492 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 TMEM128Q5BJH2 165 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 OOSP2Q86WS3 158 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 HSD17B11Q8NBQ5 300 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 DMBX1Q8NFW5 382 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 FLVCR1-AS1Q8TAF5 88 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ADAMTS17Q8TE56 1095 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 S100PBPQ96BU1 408 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 NUDT22Q9BRQ3 303 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 POLE3Q9NRF9 147 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 CACFD1Q9UGQ2 172 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RAB22AQ9UL26 194 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 UBE2CO00762 179 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 XRCC2O43543 280 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 SYT7O43581 403 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 UTS2O95399 124 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 MT-ND4LP03901 98 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 MELTFP08582 738 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 IL11P20809 199 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 BCKDHBP21953 392 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 FCGR2CP31995 323 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 EIF2S3P41091 472 aaKnown RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 GLP1RP43220 463 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 SCAND1P57086 179 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RAB38P57729 211 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 GPM6BQ13491 265 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ACTBL2Q562R1 376 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 C15orf54Q8N8G6 183 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ZDHHC22Q8N966 263 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 APCDD1LQ8NCL9 501 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 AQP3Q92482 292 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ARL5BQ96KC2 179 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 FAM71F1Q96KD3 344 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 GPX7Q96SL4 187 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 SLC17A5Q9NRA2 495 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ZNF701Q9NV72 531 aaPredicted RBP8.78□□□□□ -1
PTCHD4-202ENST00000398738 SLC2A8Q9NY64 477 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 ASH2LQ9UBL3 628 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 FBXL17Q9UF56 701 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 FLVCR1Q9Y5Y0 555 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 REV3LO60673 3130 aa8.78□□□□□ -1
PTCHD4-202ENST00000398738 RP1P56715 2156 aa8.77□□□□□ -1
PTCHD4-202ENST00000398738 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 C17orf105B2RV13 164 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 GPR89AB7ZAQ6 455 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 UMAD1C9J7I0 102 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 NPIPB9F8W1W9 429 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 K7EPK0 472 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM127O75204 238 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CRTAPO75718 401 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 GPR89BP0CG08 455 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 RNH1P13489 461 aaKnown RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 DHPSP49366 369 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CSNK2A1P68400 391 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 KIAA0141Q14154 515 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 SP6Q3SY56 376 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 PRSS54Q6PEW0 395 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 GLIPR1L1Q6UWM5 242 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CATSPERDQ86XM0 798 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 FAM71E2Q8N5Q1 922 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CSNK2A3Q8NEV1 391 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM230Q96A57 120 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 BSCL2Q96G97 398 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 LMF2Q9BU23 707 aaKnown RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 GGACTQ9BVM4 153 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 UBQLN4Q9NRR5 601 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 MED29Q9NX70 200 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 POLR1DQ9Y2S0 133 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CLDN4O14493 209 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 DIRAS3O95661 229 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 FGF19O95750 216 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 C5AR1P21730 350 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 RPL12P30050 165 aaKnown RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CAMLGP49069 296 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 CX3CR1P49238 355 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 DEFA6Q01524 100 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 EIF5AL1Q6IS14 154 aaKnown RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 FBXO46Q6PJ61 603 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 SLC26A10Q8NG04 563 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 OR5H2Q8NGV7 314 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 OR52N5Q8NH56 324 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 BAHD1Q8TBE0 780 aaPredicted RBP8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 ASB17Q8WXJ9 295 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 SLAMF9Q96A28 289 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 RAB3CQ96E17 227 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 PRO1933Q9H354 126 aa8.77□□□□□ -1.01
PTCHD4-202ENST00000398738 EHFQ9NZC4 300 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms