RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 AUNIPQ9H7T9 357 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 PNRC2Q9NPJ4 139 aaKnown RBP13□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF221Q9UK13 617 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 GTF2A1LQ9UNN4 478 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 SLC5A6Q9Y289 635 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 RHBDD3Q9Y3P4 386 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 ALG5Q9Y673 324 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 A8MXE2 369 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TTRP02766 147 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 ACSM4P0C7M7 580 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 IGHV1-2P23083 117 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CDK2P24941 298 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CDAP32320 146 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 GDNFP39905 211 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 LSM6P62312 80 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 MRPS34P82930 218 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CBX3Q13185 183 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 P2RY6Q15077 328 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 SGCAQ16586 387 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF474Q6S9Z5 364 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 IZUMO1Q8IYV9 350 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 GABRG1Q8N1C3 465 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 SLC25A28Q96A46 364 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 DPAGT1Q9H3H5 408 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 NELFAQ9H3P2 528 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 EMC7Q9NPA0 242 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 DDX28Q9NUL7 540 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TMEM38BQ9NVV0 291 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TAS2R4Q9NYW5 299 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 COPZ2Q9P299 210 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CKLFQ9UBR5 152 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 NUFIP1Q9UHK0 495 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF462Q96JM2 2506 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 HIVEP3Q5T1R4 2406 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CACNA1CQ13936 2221 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 C7orf66A4D0T2 115 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 MEGF11A6BM72 1044 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CENPXA8MT69 81 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 INMT-MINDY4F8WBC2 141 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 B4GALT1P15291 398 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 MSR1P21757 451 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 SRP9P49458 86 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TAS2R20P59543 309 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 RAB11BQ15907 218 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TBRG1Q3YBR2 411 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 TMEM69Q5SWH9 247 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 ANKRD16Q6P6B7 361 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 KLHL24Q6TFL4 600 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF813Q6ZN06 617 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 PRSS45Q7RTY3 260 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 NKAIN3Q8N8D7 197 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 OR13C3Q8NGS6 347 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 JKAMPQ9P055 326 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 MRPS7Q9Y2R9 242 aaKnown RBP12.99□□□□□ -0.33
CAPN3-207ENST00000397200 NUBP2Q9Y5Y2 271 aa12.99□□□□□ -0.33
CAPN3-207ENST00000397200 DIDO1Q9BTC0 2240 aaKnown RBP12.98□□□□□ -0.33
CAPN3-207ENST00000397200 LOC100289279A0A1B0GTE1 492 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 CIB4A0PJX0 185 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 H3BSH0 61 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 XRCC3O43542 346 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 LYZL6O75951 148 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 FARS2O95363 451 aaKnown RBP12.98□□□□□ -0.33
CAPN3-207ENST00000397200 ECDO95905 644 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-207ENST00000397200 ARSBP15848 533 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 COX5AP20674 150 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 RAG2P55895 527 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 NRN1LQ496H8 165 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 C1orf100Q5SVJ3 147 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF529Q6P280 563 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 CXorf67Q86X51 503 aaPredicted RBP12.98□□□□□ -0.33
CAPN3-207ENST00000397200 SLC22A24Q8N4F4 322 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 OR6M1Q8NGM8 313 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 OR1K1Q8NGR3 316 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 OR2AJ1Q8NGZ0 328 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 CA5BP1Q8WTZ4 195 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 NABP1Q96AH0 204 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 PBOV1Q9GZY1 135 aa12.98□□□□□ -0.33
CAPN3-207ENST00000397200 FAM90A27PA6NNH2 459 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 P2RY10O00398 339 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 LDLRAD4O15165 306 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 CTAG2O75638 210 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 RAD51DO75771 328 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 POU3F4P49335 361 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 ASCL1P50553 236 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 HIST1H3AP68431 136 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 PLA2G7Q13093 441 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 KCNJ8Q15842 424 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 HIST2H3PS2Q5TEC6 136 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 OLFML2AQ68BL7 652 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 HIST2H3AQ71DI3 136 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF627Q7L945 461 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 KRT74Q7RTS7 529 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 CDH24Q86UP0 819 aa12.97□□□□□ -0.33
CAPN3-207ENST00000397200 SERPINA12Q8IW75 414 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms