RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 CSPG4Q6UVK1 2322 aa17.7■□□□□ 0.42
SEC13-207ENST00000397105 RPP14O95059 124 aaKnown RBP17.69■□□□□ 0.42
SEC13-207ENST00000397105 FADS2O95864 444 aaKnown RBP17.69■□□□□ 0.42
SEC13-207ENST00000397105 HEXAP06865 529 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 CAPGP40121 348 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 ZNF85Q03923 595 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 MZT1Q08AG7 82 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 RAB40BQ12829 278 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 ZNF684Q5T5D7 378 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 BCL2L15Q5TBC7 163 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 LIPNQ5VXI9 398 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 KCTD20Q7Z5Y7 419 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 CELF2-AS1Q8N7Q2 184 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 SPERTQ8NA61 448 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 ADAT1Q9BUB4 502 aaKnown RBP17.69■□□□□ 0.42
SEC13-207ENST00000397105 GCM1Q9NP62 436 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 TMEM106BQ9NUM4 274 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 OR52A1Q9UKL2 312 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 GTF2A1LQ9UNN4 478 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 HSPE1-MOB4S4R3N1 261 aa17.69■□□□□ 0.42
SEC13-207ENST00000397105 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 IFNL4K9M1U5 179 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 SRSF10O75494 262 aaKnown RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 WBP4O75554 376 aaKnown RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 PNPP00491 289 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 MFGE8Q08431 387 aaPredicted RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 OR8B8Q15620 311 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 KLHL22Q53GT1 634 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 ZNF771Q7L3S4 317 aaPredicted RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 FAM220AQ7Z4H9 259 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 COMMD2Q86X83 199 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 HPS1Q92902 700 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 MRPL48Q96GC5 212 aaKnown RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 LYZL4Q96KX0 146 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 G6PC2Q9NQR9 355 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 MRPS18AQ9NVS2 196 aaKnown RBP17.68■□□□□ 0.42
SEC13-207ENST00000397105 GNG8Q9UK08 70 aa17.68■□□□□ 0.42
SEC13-207ENST00000397105 LRP5LA4QPB2 252 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 GNALP38405 381 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 CD200P41217 278 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 ISL1P61371 349 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 MVKQ03426 396 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 MAB21L1Q13394 359 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 ELMOD2Q8IZ81 293 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 OR51E1Q8TCB6 317 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 NRG4Q8WWG1 115 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 ERGIC1Q969X5 290 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 PPP1R14AQ96A00 147 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 GPR84Q9NQS5 396 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 RHBDD3Q9Y3P4 386 aa17.67■□□□□ 0.42
SEC13-207ENST00000397105 LRRC30A6NM36 301 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 H0YJX3 145 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 ATP6V1B1P15313 513 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 GATA4P43694 442 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 MAP2K3P46734 347 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 GZMKP49863 264 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 ACTA2P62736 377 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 ACTG2P63267 376 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 SMN1Q16637 294 aaKnown RBP17.66■□□□□ 0.42
SEC13-207ENST00000397105 CDONQ4KMG0 1287 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 TP53I3Q53FA7 332 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 AVPI1Q5T686 147 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 CYB5R2Q6BCY4 276 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 MOGAT3Q86VF5 341 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 C8orf59Q8N0T1 100 aaPredicted RBP17.66■□□□□ 0.42
SEC13-207ENST00000397105 PLPP7Q8NBV4 271 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 OR8S1Q8NH09 359 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 CNIH3Q8TBE1 160 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 RORBQ92753 470 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 TFAP2CQ92754 450 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 PAPOLGQ9BWT3 736 aaKnown RBP17.66■□□□□ 0.42
SEC13-207ENST00000397105 VCX3BQ9H321 246 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 INPP5EQ9NRR6 644 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 C14orf119Q9NWQ9 140 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 WIPI2Q9Y4P8 454 aa17.66■□□□□ 0.42
SEC13-207ENST00000397105 TLN2Q9Y4G6 2542 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 IGHV3-64DA0A0J9YX35 117 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 CD5LO43866 347 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 FAM20BO75063 409 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 MTRF1O75570 445 aaKnown RBP17.65■□□□□ 0.42
SEC13-207ENST00000397105 CST4P01036 141 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 IGLV3-1P01715 115 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 TTRP02766 147 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 ACKR3P25106 362 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 KRTAP1-1Q07627 177 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 Q71RC1 249 aaPredicted RBP17.65■□□□□ 0.42
SEC13-207ENST00000397105 CATSPERDQ86XM0 798 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 SEMA6DQ8NFY4 1073 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 FAM71F1Q96KD3 344 aaPredicted RBP17.65■□□□□ 0.42
SEC13-207ENST00000397105 SOX7Q9BT81 388 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 NARFLQ9H6Q4 476 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 ABCB9Q9NP78 766 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 ACOXLQ9NUZ1 547 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 MYRFQ9Y2G1 1151 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 MPC1Q9Y5U8 109 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 NPTNQ9Y639 398 aa17.65■□□□□ 0.42
SEC13-207ENST00000397105 IRGMA1A4Y4 181 aa17.64■□□□□ 0.41
SEC13-207ENST00000397105 IGHA1P01876 353 aa17.64■□□□□ 0.41
SEC13-207ENST00000397105 GNAO1P09471 354 aa17.64■□□□□ 0.41
SEC13-207ENST00000397105 IGHV4-31P0DP07 118 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms